Protein–RNA interactions for Protein: B2RD01

CENPBD1, CENPB DNA-binding domain-containing protein 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPBD1B2RD01 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CENPBD1B2RD01 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CENPBD1B2RD01 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CENPBD1B2RD01 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CENPBD1B2RD01 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
CENPBD1B2RD01 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CENPBD1B2RD01 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CENPBD1B2RD01 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CENPBD1B2RD01 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.34■□□□□ 0.37
CENPBD1B2RD01 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.34■□□□□ 0.37
CENPBD1B2RD01 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.34■□□□□ 0.37
CENPBD1B2RD01 AP003097.1-201ENST00000530657 1135 ntBASIC17.34■□□□□ 0.37
CENPBD1B2RD01 PRKY-204ENST00000533551 1019 ntBASIC17.34■□□□□ 0.37
CENPBD1B2RD01 KRT18P6-201ENST00000555540 1265 ntBASIC17.34■□□□□ 0.37
CENPBD1B2RD01 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.34■□□□□ 0.37
CENPBD1B2RD01 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.34■□□□□ 0.37
CENPBD1B2RD01 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.34■□□□□ 0.37
CENPBD1B2RD01 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.34■□□□□ 0.37
CENPBD1B2RD01 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CENPBD1B2RD01 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CENPBD1B2RD01 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.34■□□□□ 0.37
CENPBD1B2RD01 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CENPBD1B2RD01 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CENPBD1B2RD01 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.34■□□□□ 0.37
CENPBD1B2RD01 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CENPBD1B2RD01 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CENPBD1B2RD01 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CENPBD1B2RD01 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.33■□□□□ 0.37
CENPBD1B2RD01 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CENPBD1B2RD01 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
CENPBD1B2RD01 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CENPBD1B2RD01 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CENPBD1B2RD01 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CENPBD1B2RD01 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
CENPBD1B2RD01 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CENPBD1B2RD01 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CENPBD1B2RD01 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CENPBD1B2RD01 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.37
CENPBD1B2RD01 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CENPBD1B2RD01 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.33■□□□□ 0.36
CENPBD1B2RD01 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CENPBD1B2RD01 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CENPBD1B2RD01 KRT17P3-201ENST00000420566 1262 ntBASIC17.33■□□□□ 0.36
CENPBD1B2RD01 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.33■□□□□ 0.36
CENPBD1B2RD01 AC026366.1-201ENST00000488803 879 ntBASIC17.33■□□□□ 0.36
CENPBD1B2RD01 KRT18P16-201ENST00000510337 1294 ntBASIC17.33■□□□□ 0.36
CENPBD1B2RD01 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.33■□□□□ 0.36
CENPBD1B2RD01 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.33■□□□□ 0.36
CENPBD1B2RD01 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.33■□□□□ 0.36
CENPBD1B2RD01 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CENPBD1B2RD01 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CENPBD1B2RD01 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CENPBD1B2RD01 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
CENPBD1B2RD01 AC141586.5-201ENST00000624546 2050 ntBASIC17.33■□□□□ 0.36
CENPBD1B2RD01 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
CENPBD1B2RD01 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CENPBD1B2RD01 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.33■□□□□ 0.36
CENPBD1B2RD01 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CENPBD1B2RD01 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CENPBD1B2RD01 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.32■□□□□ 0.36
CENPBD1B2RD01 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CENPBD1B2RD01 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.32■□□□□ 0.36
CENPBD1B2RD01 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CENPBD1B2RD01 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.32■□□□□ 0.36
CENPBD1B2RD01 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
CENPBD1B2RD01 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CENPBD1B2RD01 AC139713.2-201ENST00000641328 2723 ntBASIC17.32■□□□□ 0.36
CENPBD1B2RD01 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CENPBD1B2RD01 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CENPBD1B2RD01 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CENPBD1B2RD01 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.32■□□□□ 0.36
CENPBD1B2RD01 AC008403.3-201ENST00000598924 454 ntBASIC17.32■□□□□ 0.36
CENPBD1B2RD01 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.32■□□□□ 0.36
CENPBD1B2RD01 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CENPBD1B2RD01 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CENPBD1B2RD01 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CENPBD1B2RD01 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CENPBD1B2RD01 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CENPBD1B2RD01 AC018470.1-201ENST00000624790 3129 ntBASIC17.32■□□□□ 0.36
CENPBD1B2RD01 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.31■□□□□ 0.36
CENPBD1B2RD01 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.31■□□□□ 0.36
CENPBD1B2RD01 KRT8P8-201ENST00000434750 1448 ntBASIC17.31■□□□□ 0.36
CENPBD1B2RD01 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CENPBD1B2RD01 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CENPBD1B2RD01 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CENPBD1B2RD01 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CENPBD1B2RD01 HCG11-201ENST00000411553 5696 ntBASIC17.31■□□□□ 0.36
CENPBD1B2RD01 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CENPBD1B2RD01 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CENPBD1B2RD01 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.31■□□□□ 0.36
CENPBD1B2RD01 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.31■□□□□ 0.36
CENPBD1B2RD01 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.31■□□□□ 0.36
CENPBD1B2RD01 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.31■□□□□ 0.36
CENPBD1B2RD01 RNA5SP413-201ENST00000516373 109 ntBASIC17.31■□□□□ 0.36
CENPBD1B2RD01 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.31■□□□□ 0.36
CENPBD1B2RD01 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CENPBD1B2RD01 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CENPBD1B2RD01 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
CENPBD1B2RD01 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CENPBD1B2RD01 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms