Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
RCCD1A6NED2 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.27■□□□□ 0.83
RCCD1A6NED2 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
RCCD1A6NED2 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RCCD1A6NED2 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.26■□□□□ 0.83
RCCD1A6NED2 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.26■□□□□ 0.83
RCCD1A6NED2 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.26■□□□□ 0.83
RCCD1A6NED2 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.26■□□□□ 0.83
RCCD1A6NED2 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.26■□□□□ 0.83
RCCD1A6NED2 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.26■□□□□ 0.83
RCCD1A6NED2 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
RCCD1A6NED2 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.26■□□□□ 0.83
RCCD1A6NED2 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
RCCD1A6NED2 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RCCD1A6NED2 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RCCD1A6NED2 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RCCD1A6NED2 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RCCD1A6NED2 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RCCD1A6NED2 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RCCD1A6NED2 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RCCD1A6NED2 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
RCCD1A6NED2 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
RCCD1A6NED2 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RCCD1A6NED2 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RCCD1A6NED2 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RCCD1A6NED2 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RCCD1A6NED2 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RCCD1A6NED2 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
RCCD1A6NED2 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.25■□□□□ 0.83
RCCD1A6NED2 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
RCCD1A6NED2 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RCCD1A6NED2 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RCCD1A6NED2 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
RCCD1A6NED2 TSPY23P-201ENST00000440136 739 ntBASIC20.25■□□□□ 0.83
RCCD1A6NED2 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.25■□□□□ 0.83
RCCD1A6NED2 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.25■□□□□ 0.83
RCCD1A6NED2 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RCCD1A6NED2 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RCCD1A6NED2 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
RCCD1A6NED2 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RCCD1A6NED2 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
RCCD1A6NED2 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.25■□□□□ 0.83
RCCD1A6NED2 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
RCCD1A6NED2 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
RCCD1A6NED2 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RCCD1A6NED2 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RCCD1A6NED2 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RCCD1A6NED2 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.25■□□□□ 0.83
RCCD1A6NED2 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RCCD1A6NED2 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RCCD1A6NED2 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RCCD1A6NED2 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RCCD1A6NED2 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RCCD1A6NED2 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.24■□□□□ 0.83
RCCD1A6NED2 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RCCD1A6NED2 ABALON-201ENST00000629058 1903 ntBASIC20.24■□□□□ 0.83
RCCD1A6NED2 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RCCD1A6NED2 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RCCD1A6NED2 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RCCD1A6NED2 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.24■□□□□ 0.83
RCCD1A6NED2 NCF1B-203ENST00000435988 1254 ntBASIC20.24■□□□□ 0.83
RCCD1A6NED2 AC006970.2-201ENST00000450065 779 ntBASIC20.24■□□□□ 0.83
RCCD1A6NED2 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.24■□□□□ 0.83
RCCD1A6NED2 AC097658.1-201ENST00000475555 843 ntBASIC20.24■□□□□ 0.83
RCCD1A6NED2 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.24■□□□□ 0.83
RCCD1A6NED2 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.24■□□□□ 0.83
RCCD1A6NED2 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RCCD1A6NED2 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.24■□□□□ 0.83
RCCD1A6NED2 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RCCD1A6NED2 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.24■□□□□ 0.83
RCCD1A6NED2 SOX15-203ENST00000570788 1093 ntBASIC20.24■□□□□ 0.83
RCCD1A6NED2 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.24■□□□□ 0.83
RCCD1A6NED2 AC073592.3-201ENST00000625118 1834 ntBASIC20.24■□□□□ 0.83
RCCD1A6NED2 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
RCCD1A6NED2 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RCCD1A6NED2 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RCCD1A6NED2 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.24■□□□□ 0.83
RCCD1A6NED2 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RCCD1A6NED2 AL499627.1-201ENST00000569373 2188 ntBASIC20.24■□□□□ 0.83
RCCD1A6NED2 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RCCD1A6NED2 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.24■□□□□ 0.83
RCCD1A6NED2 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RCCD1A6NED2 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RCCD1A6NED2 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
RCCD1A6NED2 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
RCCD1A6NED2 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RCCD1A6NED2 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RCCD1A6NED2 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RCCD1A6NED2 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RCCD1A6NED2 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RCCD1A6NED2 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RCCD1A6NED2 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.23■□□□□ 0.83
RCCD1A6NED2 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.23■□□□□ 0.83
RCCD1A6NED2 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.23■□□□□ 0.83
RCCD1A6NED2 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RCCD1A6NED2 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.23■□□□□ 0.83
RCCD1A6NED2 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.23■□□□□ 0.83
RCCD1A6NED2 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
RCCD1A6NED2 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.23■□□□□ 0.83
RCCD1A6NED2 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms