Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
CCDC78A2IDD5 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
CCDC78A2IDD5 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC78A2IDD5 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.29■□□□□ 0.68
CCDC78A2IDD5 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC78A2IDD5 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC78A2IDD5 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.29■□□□□ 0.68
CCDC78A2IDD5 RPPH1-201ENST00000516869 333 ntBASIC19.29■□□□□ 0.68
CCDC78A2IDD5 ITM2C-210ENST00000620962 501 ntBASIC19.29■□□□□ 0.68
CCDC78A2IDD5 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC78A2IDD5 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC78A2IDD5 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
CCDC78A2IDD5 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC78A2IDD5 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC78A2IDD5 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC78A2IDD5 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC78A2IDD5 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC78A2IDD5 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC78A2IDD5 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC78A2IDD5 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC78A2IDD5 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC78A2IDD5 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC78A2IDD5 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
CCDC78A2IDD5 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC78A2IDD5 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC78A2IDD5 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CCDC78A2IDD5 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC78A2IDD5 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC78A2IDD5 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC78A2IDD5 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC78A2IDD5 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC78A2IDD5 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.28■□□□□ 0.68
CCDC78A2IDD5 AL160286.2-201ENST00000567150 934 ntBASIC19.28■□□□□ 0.68
CCDC78A2IDD5 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.28■□□□□ 0.68
CCDC78A2IDD5 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CCDC78A2IDD5 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC78A2IDD5 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CCDC78A2IDD5 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC78A2IDD5 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC78A2IDD5 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC78A2IDD5 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CCDC78A2IDD5 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC78A2IDD5 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC78A2IDD5 AC006333.2-201ENST00000607957 2099 ntBASIC19.28■□□□□ 0.68
CCDC78A2IDD5 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC78A2IDD5 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC78A2IDD5 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC78A2IDD5 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC78A2IDD5 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC78A2IDD5 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.27■□□□□ 0.68
CCDC78A2IDD5 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC78A2IDD5 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC78A2IDD5 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CCDC78A2IDD5 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC78A2IDD5 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CCDC78A2IDD5 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CCDC78A2IDD5 AC133681.1-201ENST00000465482 601 ntBASIC19.27■□□□□ 0.68
CCDC78A2IDD5 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.27■□□□□ 0.68
CCDC78A2IDD5 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC78A2IDD5 FAM197Y4-202ENST00000622692 608 ntBASIC19.27■□□□□ 0.68
CCDC78A2IDD5 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC78A2IDD5 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CCDC78A2IDD5 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC78A2IDD5 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CCDC78A2IDD5 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC78A2IDD5 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC78A2IDD5 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC78A2IDD5 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.27■□□□□ 0.67
CCDC78A2IDD5 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
CCDC78A2IDD5 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.67
CCDC78A2IDD5 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC78A2IDD5 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC78A2IDD5 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CCDC78A2IDD5 HTR7P1-201ENST00000538670 1336 ntBASIC19.26■□□□□ 0.67
CCDC78A2IDD5 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC78A2IDD5 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC78A2IDD5 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC78A2IDD5 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
CCDC78A2IDD5 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC78A2IDD5 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CCDC78A2IDD5 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC78A2IDD5 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC78A2IDD5 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC78A2IDD5 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.26■□□□□ 0.67
CCDC78A2IDD5 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC78A2IDD5 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC78A2IDD5 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC78A2IDD5 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC78A2IDD5 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CCDC78A2IDD5 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CCDC78A2IDD5 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC78A2IDD5 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC78A2IDD5 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CCDC78A2IDD5 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC78A2IDD5 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC78A2IDD5 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CCDC78A2IDD5 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC78A2IDD5 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC78A2IDD5 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC78A2IDD5 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms