Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
TCRBV3S1A0A5B6 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
TCRBV3S1A0A5B6 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TCRBV3S1A0A5B6 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TCRBV3S1A0A5B6 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TCRBV3S1A0A5B6 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TCRBV3S1A0A5B6 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC17.84■□□□□ 0.45
TCRBV3S1A0A5B6 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC17.84■□□□□ 0.45
TCRBV3S1A0A5B6 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.84■□□□□ 0.45
TCRBV3S1A0A5B6 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.84■□□□□ 0.45
TCRBV3S1A0A5B6 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.84■□□□□ 0.45
TCRBV3S1A0A5B6 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
TCRBV3S1A0A5B6 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TCRBV3S1A0A5B6 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TCRBV3S1A0A5B6 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TCRBV3S1A0A5B6 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TCRBV3S1A0A5B6 AC134043.2-201ENST00000624206 2238 ntBASIC17.84■□□□□ 0.45
TCRBV3S1A0A5B6 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TCRBV3S1A0A5B6 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TCRBV3S1A0A5B6 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TCRBV3S1A0A5B6 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TCRBV3S1A0A5B6 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TCRBV3S1A0A5B6 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.84■□□□□ 0.45
TCRBV3S1A0A5B6 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
TCRBV3S1A0A5B6 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
TCRBV3S1A0A5B6 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TCRBV3S1A0A5B6 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.83■□□□□ 0.45
TCRBV3S1A0A5B6 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TCRBV3S1A0A5B6 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
TCRBV3S1A0A5B6 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TCRBV3S1A0A5B6 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.83■□□□□ 0.45
TCRBV3S1A0A5B6 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.83■□□□□ 0.45
TCRBV3S1A0A5B6 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TCRBV3S1A0A5B6 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TCRBV3S1A0A5B6 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.83■□□□□ 0.44
TCRBV3S1A0A5B6 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
TCRBV3S1A0A5B6 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TCRBV3S1A0A5B6 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.83■□□□□ 0.44
TCRBV3S1A0A5B6 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TCRBV3S1A0A5B6 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC17.83■□□□□ 0.44
TCRBV3S1A0A5B6 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TCRBV3S1A0A5B6 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.83■□□□□ 0.44
TCRBV3S1A0A5B6 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
TCRBV3S1A0A5B6 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TCRBV3S1A0A5B6 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
TCRBV3S1A0A5B6 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
TCRBV3S1A0A5B6 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TCRBV3S1A0A5B6 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TCRBV3S1A0A5B6 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.83■□□□□ 0.44
TCRBV3S1A0A5B6 KRT17P1-201ENST00000399211 1546 ntBASIC17.82■□□□□ 0.44
TCRBV3S1A0A5B6 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TCRBV3S1A0A5B6 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TCRBV3S1A0A5B6 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TCRBV3S1A0A5B6 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TCRBV3S1A0A5B6 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TCRBV3S1A0A5B6 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TCRBV3S1A0A5B6 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.82■□□□□ 0.44
TCRBV3S1A0A5B6 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
TCRBV3S1A0A5B6 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TCRBV3S1A0A5B6 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TCRBV3S1A0A5B6 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TCRBV3S1A0A5B6 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TCRBV3S1A0A5B6 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TCRBV3S1A0A5B6 GPX1P1-201ENST00000388829 606 ntBASIC17.82■□□□□ 0.44
TCRBV3S1A0A5B6 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.82■□□□□ 0.44
TCRBV3S1A0A5B6 BID-214ENST00000617586 542 ntTSL 5 BASIC17.82■□□□□ 0.44
TCRBV3S1A0A5B6 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TCRBV3S1A0A5B6 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TCRBV3S1A0A5B6 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
TCRBV3S1A0A5B6 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TCRBV3S1A0A5B6 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.82■□□□□ 0.44
TCRBV3S1A0A5B6 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.82■□□□□ 0.44
TCRBV3S1A0A5B6 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TCRBV3S1A0A5B6 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
TCRBV3S1A0A5B6 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TCRBV3S1A0A5B6 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.82■□□□□ 0.44
TCRBV3S1A0A5B6 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TCRBV3S1A0A5B6 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TCRBV3S1A0A5B6 AC010980.2-201ENST00000587099 1412 ntBASIC17.81■□□□□ 0.44
TCRBV3S1A0A5B6 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.81■□□□□ 0.44
TCRBV3S1A0A5B6 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
TCRBV3S1A0A5B6 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TCRBV3S1A0A5B6 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TCRBV3S1A0A5B6 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TCRBV3S1A0A5B6 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TCRBV3S1A0A5B6 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TCRBV3S1A0A5B6 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
TCRBV3S1A0A5B6 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TCRBV3S1A0A5B6 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TCRBV3S1A0A5B6 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TCRBV3S1A0A5B6 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
TCRBV3S1A0A5B6 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TCRBV3S1A0A5B6 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
TCRBV3S1A0A5B6 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.81■□□□□ 0.44
TCRBV3S1A0A5B6 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TCRBV3S1A0A5B6 CYP2T1P-201ENST00000432607 1285 ntBASIC17.81■□□□□ 0.44
TCRBV3S1A0A5B6 KRT18P11-201ENST00000435214 1283 ntBASIC17.81■□□□□ 0.44
TCRBV3S1A0A5B6 SLC25A6P5-201ENST00000435663 894 ntBASIC17.81■□□□□ 0.44
TCRBV3S1A0A5B6 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TCRBV3S1A0A5B6 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms