Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV27A0A0K0K1C4 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV27A0A0K0K1C4 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV27A0A0K0K1C4 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV27A0A0K0K1C4 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV27A0A0K0K1C4 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC13.47□□□□□ -0.25
TRBV27A0A0K0K1C4 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC13.47□□□□□ -0.25
TRBV27A0A0K0K1C4 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV27A0A0K0K1C4 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
TRBV27A0A0K0K1C4 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC13.47□□□□□ -0.25
TRBV27A0A0K0K1C4 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
TRBV27A0A0K0K1C4 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV27A0A0K0K1C4 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC13.47□□□□□ -0.25
TRBV27A0A0K0K1C4 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV27A0A0K0K1C4 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC13.47□□□□□ -0.25
TRBV27A0A0K0K1C4 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV27A0A0K0K1C4 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC13.47□□□□□ -0.25
TRBV27A0A0K0K1C4 RAP2CP1-201ENST00000605103 478 ntBASIC13.47□□□□□ -0.25
TRBV27A0A0K0K1C4 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV27A0A0K0K1C4 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV27A0A0K0K1C4 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
TRBV27A0A0K0K1C4 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC13.47□□□□□ -0.25
TRBV27A0A0K0K1C4 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC13.47□□□□□ -0.25
TRBV27A0A0K0K1C4 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV27A0A0K0K1C4 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC13.47□□□□□ -0.25
TRBV27A0A0K0K1C4 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV27A0A0K0K1C4 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV27A0A0K0K1C4 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC13.47□□□□□ -0.25
TRBV27A0A0K0K1C4 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV27A0A0K0K1C4 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
TRBV27A0A0K0K1C4 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV27A0A0K0K1C4 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRBV27A0A0K0K1C4 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.25
TRBV27A0A0K0K1C4 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRBV27A0A0K0K1C4 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRBV27A0A0K0K1C4 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC13.46□□□□□ -0.25
TRBV27A0A0K0K1C4 GATB-213ENST00000515812 1893 ntTSL 5 BASIC13.46□□□□□ -0.25
TRBV27A0A0K0K1C4 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
TRBV27A0A0K0K1C4 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC13.46□□□□□ -0.25
TRBV27A0A0K0K1C4 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC13.46□□□□□ -0.25
TRBV27A0A0K0K1C4 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRBV27A0A0K0K1C4 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRBV27A0A0K0K1C4 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
TRBV27A0A0K0K1C4 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRBV27A0A0K0K1C4 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC13.46□□□□□ -0.25
TRBV27A0A0K0K1C4 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRBV27A0A0K0K1C4 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
TRBV27A0A0K0K1C4 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRBV27A0A0K0K1C4 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRBV27A0A0K0K1C4 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRBV27A0A0K0K1C4 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC13.46□□□□□ -0.25
TRBV27A0A0K0K1C4 ZNRF2P3-201ENST00000424200 374 ntBASIC13.46□□□□□ -0.25
TRBV27A0A0K0K1C4 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC13.46□□□□□ -0.25
TRBV27A0A0K0K1C4 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRBV27A0A0K0K1C4 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC13.46□□□□□ -0.25
TRBV27A0A0K0K1C4 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC13.46□□□□□ -0.25
TRBV27A0A0K0K1C4 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC13.46□□□□□ -0.25
TRBV27A0A0K0K1C4 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC13.46□□□□□ -0.25
TRBV27A0A0K0K1C4 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC13.46□□□□□ -0.25
TRBV27A0A0K0K1C4 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRBV27A0A0K0K1C4 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRBV27A0A0K0K1C4 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRBV27A0A0K0K1C4 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC13.46□□□□□ -0.26
TRBV27A0A0K0K1C4 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC13.46□□□□□ -0.26
TRBV27A0A0K0K1C4 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRBV27A0A0K0K1C4 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
TRBV27A0A0K0K1C4 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRBV27A0A0K0K1C4 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRBV27A0A0K0K1C4 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC13.46□□□□□ -0.26
TRBV27A0A0K0K1C4 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRBV27A0A0K0K1C4 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRBV27A0A0K0K1C4 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
TRBV27A0A0K0K1C4 CRK-204ENST00000574295 1391 ntTSL 5 BASIC13.45□□□□□ -0.26
TRBV27A0A0K0K1C4 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
TRBV27A0A0K0K1C4 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
TRBV27A0A0K0K1C4 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
TRBV27A0A0K0K1C4 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV27A0A0K0K1C4 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
TRBV27A0A0K0K1C4 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV27A0A0K0K1C4 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV27A0A0K0K1C4 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV27A0A0K0K1C4 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV27A0A0K0K1C4 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV27A0A0K0K1C4 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
TRBV27A0A0K0K1C4 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV27A0A0K0K1C4 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV27A0A0K0K1C4 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC13.45□□□□□ -0.26
TRBV27A0A0K0K1C4 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV27A0A0K0K1C4 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV27A0A0K0K1C4 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV27A0A0K0K1C4 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC13.45□□□□□ -0.26
TRBV27A0A0K0K1C4 GGT1-206ENST00000404223 952 ntTSL 2 BASIC13.45□□□□□ -0.26
TRBV27A0A0K0K1C4 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC13.45□□□□□ -0.26
TRBV27A0A0K0K1C4 AC006015.1-201ENST00000429970 570 ntBASIC13.45□□□□□ -0.26
TRBV27A0A0K0K1C4 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
TRBV27A0A0K0K1C4 AC093787.1-201ENST00000450396 207 ntBASIC13.45□□□□□ -0.26
TRBV27A0A0K0K1C4 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC13.45□□□□□ -0.26
TRBV27A0A0K0K1C4 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC13.45□□□□□ -0.26
TRBV27A0A0K0K1C4 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV27A0A0K0K1C4 MDK-213ENST00000617138 635 ntTSL 2 BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms