Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.23■□□□□ 0.35
TRAV17A0A0B4J275 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV17A0A0B4J275 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV17A0A0B4J275 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV17A0A0B4J275 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.22■□□□□ 0.35
TRAV17A0A0B4J275 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV17A0A0B4J275 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TRAV17A0A0B4J275 KRT8P3-201ENST00000519669 1449 ntBASIC17.22■□□□□ 0.35
TRAV17A0A0B4J275 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV17A0A0B4J275 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV17A0A0B4J275 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV17A0A0B4J275 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.22■□□□□ 0.35
TRAV17A0A0B4J275 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV17A0A0B4J275 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV17A0A0B4J275 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV17A0A0B4J275 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.22■□□□□ 0.35
TRAV17A0A0B4J275 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV17A0A0B4J275 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.22■□□□□ 0.35
TRAV17A0A0B4J275 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV17A0A0B4J275 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.22■□□□□ 0.35
TRAV17A0A0B4J275 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.22■□□□□ 0.35
TRAV17A0A0B4J275 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.22■□□□□ 0.35
TRAV17A0A0B4J275 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV17A0A0B4J275 AC036111.1-201ENST00000533973 1582 ntBASIC17.22■□□□□ 0.35
TRAV17A0A0B4J275 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV17A0A0B4J275 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV17A0A0B4J275 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.21■□□□□ 0.35
TRAV17A0A0B4J275 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.21■□□□□ 0.35
TRAV17A0A0B4J275 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV17A0A0B4J275 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV17A0A0B4J275 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.21■□□□□ 0.35
TRAV17A0A0B4J275 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV17A0A0B4J275 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TRAV17A0A0B4J275 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
TRAV17A0A0B4J275 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV17A0A0B4J275 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV17A0A0B4J275 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV17A0A0B4J275 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
TRAV17A0A0B4J275 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV17A0A0B4J275 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV17A0A0B4J275 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.21■□□□□ 0.35
TRAV17A0A0B4J275 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.21■□□□□ 0.35
TRAV17A0A0B4J275 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TRAV17A0A0B4J275 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TRAV17A0A0B4J275 HBZP1-201ENST00000354915 429 ntBASIC17.21■□□□□ 0.35
TRAV17A0A0B4J275 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV17A0A0B4J275 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV17A0A0B4J275 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.21■□□□□ 0.35
TRAV17A0A0B4J275 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV17A0A0B4J275 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
TRAV17A0A0B4J275 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.21■□□□□ 0.35
TRAV17A0A0B4J275 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.21■□□□□ 0.35
TRAV17A0A0B4J275 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.21■□□□□ 0.35
TRAV17A0A0B4J275 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.21■□□□□ 0.35
TRAV17A0A0B4J275 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.21■□□□□ 0.35
TRAV17A0A0B4J275 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV17A0A0B4J275 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
TRAV17A0A0B4J275 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.21■□□□□ 0.35
TRAV17A0A0B4J275 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV17A0A0B4J275 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV17A0A0B4J275 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.21■□□□□ 0.35
TRAV17A0A0B4J275 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV17A0A0B4J275 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.21■□□□□ 0.35
TRAV17A0A0B4J275 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV17A0A0B4J275 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.21■□□□□ 0.35
TRAV17A0A0B4J275 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TRAV17A0A0B4J275 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TRAV17A0A0B4J275 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.21■□□□□ 0.34
TRAV17A0A0B4J275 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TRAV17A0A0B4J275 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TRAV17A0A0B4J275 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV17A0A0B4J275 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.2■□□□□ 0.34
TRAV17A0A0B4J275 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
TRAV17A0A0B4J275 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV17A0A0B4J275 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV17A0A0B4J275 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV17A0A0B4J275 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
TRAV17A0A0B4J275 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.2■□□□□ 0.34
TRAV17A0A0B4J275 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV17A0A0B4J275 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV17A0A0B4J275 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
TRAV17A0A0B4J275 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV17A0A0B4J275 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV17A0A0B4J275 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV17A0A0B4J275 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV17A0A0B4J275 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV17A0A0B4J275 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.2■□□□□ 0.34
TRAV17A0A0B4J275 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.2■□□□□ 0.34
TRAV17A0A0B4J275 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
TRAV17A0A0B4J275 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.2■□□□□ 0.34
TRAV17A0A0B4J275 AC024243.1-201ENST00000609234 778 ntBASIC17.2■□□□□ 0.34
TRAV17A0A0B4J275 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.2■□□□□ 0.34
TRAV17A0A0B4J275 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV17A0A0B4J275 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV17A0A0B4J275 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV17A0A0B4J275 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV17A0A0B4J275 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV17A0A0B4J275 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.2■□□□□ 0.34
TRAV17A0A0B4J275 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV17A0A0B4J275 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms