Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV2A0A0B4J234 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV2A0A0B4J234 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV2A0A0B4J234 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV2A0A0B4J234 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV2A0A0B4J234 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV2A0A0B4J234 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV2A0A0B4J234 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV2A0A0B4J234 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV2A0A0B4J234 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV2A0A0B4J234 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC14.41□□□□□ -0.1
TRAV2A0A0B4J234 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
TRAV2A0A0B4J234 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
TRAV2A0A0B4J234 BCL2-203ENST00000589955 5011 ntBASIC14.41□□□□□ -0.1
TRAV2A0A0B4J234 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV2A0A0B4J234 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV2A0A0B4J234 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV2A0A0B4J234 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV2A0A0B4J234 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV2A0A0B4J234 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV2A0A0B4J234 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV2A0A0B4J234 AC005332.7-201ENST00000614046 2005 ntBASIC14.41□□□□□ -0.1
TRAV2A0A0B4J234 AC141586.3-201ENST00000562166 1838 ntBASIC14.41□□□□□ -0.1
TRAV2A0A0B4J234 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV2A0A0B4J234 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV2A0A0B4J234 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV2A0A0B4J234 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV2A0A0B4J234 MME-217ENST00000616757 1315 ntTSL 5 BASIC14.41□□□□□ -0.1
TRAV2A0A0B4J234 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
TRAV2A0A0B4J234 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV2A0A0B4J234 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV2A0A0B4J234 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
TRAV2A0A0B4J234 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAV2A0A0B4J234 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV2A0A0B4J234 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV2A0A0B4J234 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV2A0A0B4J234 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV2A0A0B4J234 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV2A0A0B4J234 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV2A0A0B4J234 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV2A0A0B4J234 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC14.4□□□□□ -0.1
TRAV2A0A0B4J234 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC14.4□□□□□ -0.1
TRAV2A0A0B4J234 RPS2P4-201ENST00000476944 856 ntBASIC14.4□□□□□ -0.1
TRAV2A0A0B4J234 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC14.4□□□□□ -0.1
TRAV2A0A0B4J234 Z85996.1-201ENST00000494644 937 ntBASIC14.4□□□□□ -0.1
TRAV2A0A0B4J234 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC14.4□□□□□ -0.1
TRAV2A0A0B4J234 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC14.4□□□□□ -0.1
TRAV2A0A0B4J234 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV2A0A0B4J234 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAV2A0A0B4J234 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TRAV2A0A0B4J234 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV2A0A0B4J234 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV2A0A0B4J234 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV2A0A0B4J234 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV2A0A0B4J234 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV2A0A0B4J234 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAV2A0A0B4J234 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAV2A0A0B4J234 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV2A0A0B4J234 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV2A0A0B4J234 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC14.4□□□□□ -0.1
TRAV2A0A0B4J234 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV2A0A0B4J234 SRI-203ENST00000419179 1307 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAV2A0A0B4J234 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC14.4□□□□□ -0.1
TRAV2A0A0B4J234 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
TRAV2A0A0B4J234 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAV2A0A0B4J234 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
TRAV2A0A0B4J234 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC14.39□□□□□ -0.11
TRAV2A0A0B4J234 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC14.39□□□□□ -0.11
TRAV2A0A0B4J234 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV2A0A0B4J234 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC14.39□□□□□ -0.11
TRAV2A0A0B4J234 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV2A0A0B4J234 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV2A0A0B4J234 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV2A0A0B4J234 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TRAV2A0A0B4J234 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC14.39□□□□□ -0.11
TRAV2A0A0B4J234 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV2A0A0B4J234 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV2A0A0B4J234 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV2A0A0B4J234 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV2A0A0B4J234 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
TRAV2A0A0B4J234 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TRAV2A0A0B4J234 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV2A0A0B4J234 AC004951.3-201ENST00000418645 1148 ntBASIC14.39□□□□□ -0.11
TRAV2A0A0B4J234 SAPCD2P4-201ENST00000424595 1171 ntBASIC14.39□□□□□ -0.11
TRAV2A0A0B4J234 PRSS44-201ENST00000515154 1146 ntBASIC14.39□□□□□ -0.11
TRAV2A0A0B4J234 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
TRAV2A0A0B4J234 TK2-204ENST00000525974 1178 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAV2A0A0B4J234 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC14.39□□□□□ -0.11
TRAV2A0A0B4J234 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC14.39□□□□□ -0.11
TRAV2A0A0B4J234 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAV2A0A0B4J234 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAV2A0A0B4J234 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV2A0A0B4J234 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV2A0A0B4J234 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV2A0A0B4J234 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV2A0A0B4J234 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV2A0A0B4J234 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
TRAV2A0A0B4J234 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV2A0A0B4J234 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV2A0A0B4J234 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms