Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC13.51□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC13.51□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC13.51□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC13.51□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC13.51□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 AL031963.3-201ENST00000606441 850 ntBASIC13.51□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC13.51□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC13.5□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 KRT16P6-202ENST00000425692 1426 ntBASIC13.5□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC13.5□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC13.5□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC13.5□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC13.5□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 AC009237.14-201ENST00000609975 1594 ntBASIC13.49□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC13.49□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC13.49□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 KRT8P17-201ENST00000453110 1448 ntBASIC13.49□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC13.49□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 RER1-204ENST00000378518 522 ntTSL 3 BASIC13.49□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC13.49□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 REXO2-208ENST00000539754 791 ntTSL 2 BASIC13.49□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC13.49□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 AC083880.1-201ENST00000608266 535 ntBASIC13.49□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC13.49□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC13.49□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC13.49□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC13.49□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC13.49□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC13.49□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 CROCCP3-202ENST00000420820 1947 ntBASIC13.49□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC13.49□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms