Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC12.74□□□□□ -0.37
TRBV20-1A0A075B6N2 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV20-1A0A075B6N2 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV20-1A0A075B6N2 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV20-1A0A075B6N2 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV20-1A0A075B6N2 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV20-1A0A075B6N2 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV20-1A0A075B6N2 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV20-1A0A075B6N2 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV20-1A0A075B6N2 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TRBV20-1A0A075B6N2 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV20-1A0A075B6N2 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV20-1A0A075B6N2 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV20-1A0A075B6N2 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV20-1A0A075B6N2 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC12.73□□□□□ -0.37
TRBV20-1A0A075B6N2 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV20-1A0A075B6N2 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV20-1A0A075B6N2 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV20-1A0A075B6N2 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV20-1A0A075B6N2 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV20-1A0A075B6N2 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
TRBV20-1A0A075B6N2 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV20-1A0A075B6N2 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
TRBV20-1A0A075B6N2 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC12.73□□□□□ -0.37
TRBV20-1A0A075B6N2 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV20-1A0A075B6N2 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV20-1A0A075B6N2 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV20-1A0A075B6N2 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV20-1A0A075B6N2 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
TRBV20-1A0A075B6N2 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC12.73□□□□□ -0.37
TRBV20-1A0A075B6N2 MIR6765-201ENST00000614092 87 ntBASIC12.73□□□□□ -0.37
TRBV20-1A0A075B6N2 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC12.73□□□□□ -0.37
TRBV20-1A0A075B6N2 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV20-1A0A075B6N2 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
TRBV20-1A0A075B6N2 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV20-1A0A075B6N2 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV20-1A0A075B6N2 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC12.73□□□□□ -0.37
TRBV20-1A0A075B6N2 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
TRBV20-1A0A075B6N2 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV20-1A0A075B6N2 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV20-1A0A075B6N2 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC12.73□□□□□ -0.37
TRBV20-1A0A075B6N2 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV20-1A0A075B6N2 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV20-1A0A075B6N2 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV20-1A0A075B6N2 AC011676.5-201ENST00000624864 2660 ntBASIC12.73□□□□□ -0.37
TRBV20-1A0A075B6N2 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC12.73□□□□□ -0.37
TRBV20-1A0A075B6N2 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV20-1A0A075B6N2 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV20-1A0A075B6N2 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV20-1A0A075B6N2 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
TRBV20-1A0A075B6N2 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC12.73□□□□□ -0.37
TRBV20-1A0A075B6N2 AC009831.1-201ENST00000580420 1582 ntBASIC12.73□□□□□ -0.37
TRBV20-1A0A075B6N2 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRBV20-1A0A075B6N2 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV20-1A0A075B6N2 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC12.72□□□□□ -0.37
TRBV20-1A0A075B6N2 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV20-1A0A075B6N2 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV20-1A0A075B6N2 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV20-1A0A075B6N2 STX4-202ENST00000394998 1498 ntTSL 2 BASIC12.72□□□□□ -0.37
TRBV20-1A0A075B6N2 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
TRBV20-1A0A075B6N2 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC12.72□□□□□ -0.37
TRBV20-1A0A075B6N2 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC12.72□□□□□ -0.37
TRBV20-1A0A075B6N2 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
TRBV20-1A0A075B6N2 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV20-1A0A075B6N2 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV20-1A0A075B6N2 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV20-1A0A075B6N2 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV20-1A0A075B6N2 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV20-1A0A075B6N2 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV20-1A0A075B6N2 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV20-1A0A075B6N2 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV20-1A0A075B6N2 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV20-1A0A075B6N2 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC12.72□□□□□ -0.37
TRBV20-1A0A075B6N2 RNF126P1-201ENST00000567452 1320 ntBASIC12.72□□□□□ -0.37
TRBV20-1A0A075B6N2 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV20-1A0A075B6N2 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV20-1A0A075B6N2 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV20-1A0A075B6N2 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC12.72□□□□□ -0.37
TRBV20-1A0A075B6N2 HSD17B1P1-201ENST00000590052 955 ntBASIC12.72□□□□□ -0.37
TRBV20-1A0A075B6N2 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC12.72□□□□□ -0.37
TRBV20-1A0A075B6N2 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
TRBV20-1A0A075B6N2 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV20-1A0A075B6N2 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC12.72□□□□□ -0.37
TRBV20-1A0A075B6N2 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV20-1A0A075B6N2 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV20-1A0A075B6N2 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV20-1A0A075B6N2 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
TRBV20-1A0A075B6N2 MYB-242ENST00000618728 3545 ntTSL 5 BASIC12.72□□□□□ -0.37
TRBV20-1A0A075B6N2 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV20-1A0A075B6N2 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
TRBV20-1A0A075B6N2 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV20-1A0A075B6N2 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV20-1A0A075B6N2 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV20-1A0A075B6N2 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRBV20-1A0A075B6N2 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC12.72□□□□□ -0.37
TRBV20-1A0A075B6N2 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
TRBV20-1A0A075B6N2 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRBV20-1A0A075B6N2 AC135776.1-201ENST00000319817 2481 ntBASIC12.71□□□□□ -0.37
TRBV20-1A0A075B6N2 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
TRBV20-1A0A075B6N2 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms