Protein–RNA interactions for Protein: Q9BYQ6

KRTAP4-11, Keratin-associated protein 4-11, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-11Q9BYQ6 TNPO3-202ENST00000471166 3019 ntTSL 5 BASIC2.05□□□□□ -2.08
KRTAP4-11Q9BYQ6 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC2.05□□□□□ -2.08
KRTAP4-11Q9BYQ6 GJA5-202ENST00000579774 3181 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
KRTAP4-11Q9BYQ6 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC2.05□□□□□ -2.08
KRTAP4-11Q9BYQ6 FAM13C-215ENST00000614220 3388 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
KRTAP4-11Q9BYQ6 PARP9-202ENST00000462315 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
KRTAP4-11Q9BYQ6 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
KRTAP4-11Q9BYQ6 ERMAP-203ENST00000372517 3423 ntAPPRIS P2 TSL 1 (best) BASIC2.05□□□□□ -2.08
KRTAP4-11Q9BYQ6 LINC01940-201ENST00000455228 3489 ntTSL 2 BASIC2.05□□□□□ -2.08
KRTAP4-11Q9BYQ6 CYFIP2-210ENST00000522463 3477 ntTSL 2 BASIC2.05□□□□□ -2.08
KRTAP4-11Q9BYQ6 PTPRM-202ENST00000400053 5292 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
KRTAP4-11Q9BYQ6 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
KRTAP4-11Q9BYQ6 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC2.05□□□□□ -2.08
KRTAP4-11Q9BYQ6 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC2.05□□□□□ -2.08
KRTAP4-11Q9BYQ6 FAR2-202ENST00000536681 3616 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
KRTAP4-11Q9BYQ6 CBFA2T2-204ENST00000359606 7274 ntTSL 2 BASIC2.05□□□□□ -2.08
KRTAP4-11Q9BYQ6 CD302-204ENST00000553424 3866 ntTSL 2 BASIC2.05□□□□□ -2.08
KRTAP4-11Q9BYQ6 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC2.05□□□□□ -2.08
KRTAP4-11Q9BYQ6 MUC22-201ENST00000561890 6019 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
KRTAP4-11Q9BYQ6 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
KRTAP4-11Q9BYQ6 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC2.05□□□□□ -2.08
KRTAP4-11Q9BYQ6 PLAGL1-205ENST00000392307 6296 ntTSL 2 BASIC2.05□□□□□ -2.08
KRTAP4-11Q9BYQ6 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
KRTAP4-11Q9BYQ6 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
KRTAP4-11Q9BYQ6 CRNKL1-201ENST00000377327 4370 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
KRTAP4-11Q9BYQ6 GRB10-204ENST00000398812 4705 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
KRTAP4-11Q9BYQ6 LRTOMT-203ENST00000324866 2402 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
KRTAP4-11Q9BYQ6 CLASP1-203ENST00000409078 8002 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 VCAN-208ENST00000512590 5923 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 NELL1-203ENST00000357134 3022 ntAPPRIS P3 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 TBC1D5-219ENST00000446818 3124 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 DIO2-201ENST00000422005 6272 ntTSL 5 BASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 UTRN-203ENST00000367526 3220 ntTSL 5 BASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 POLR3A-201ENST00000372371 6640 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 SMG1P1-202ENST00000309865 4223 ntBASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 PPP2R5C-202ENST00000334743 4328 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 GHR-213ENST00000622294 4312 ntTSL 5 BASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 LINC01695-203ENST00000453420 4486 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 AP004147.1-201ENST00000505153 6314 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 NIPBL-202ENST00000448238 8729 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 SCN9A-203ENST00000409672 9768 ntAPPRIS P2 TSL 5 BASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 ZNF780B-201ENST00000221355 3538 ntTSL 2 BASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 SPRR2C-201ENST00000290702 219 ntBASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 NRXN3-202ENST00000335750 2764 ntTSL 5 BASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 ITSN2-202ENST00000361999 5814 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 RN7SKP55-201ENST00000364888 307 ntBASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 Y_RNA.325-201ENST00000365171 122 ntBASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 SMARCA1-203ENST00000371123 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 GCNA-202ENST00000373696 2791 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 SNORA68-201ENST00000384437 133 ntBASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 SNORA70E-201ENST00000384492 135 ntBASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 SNORA8-201ENST00000384574 139 ntBASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 Y_RNA.537-201ENST00000384626 109 ntBASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 OTOA-202ENST00000388956 3466 ntAPPRIS ALT2 TSL 2 BASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 MIR147B-201ENST00000390185 80 ntBASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 SNORD28B-201ENST00000390993 75 ntBASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 KIF23-203ENST00000395392 3357 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 AC026310.1-201ENST00000396004 378 ntBASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 AC116351.1-201ENST00000399869 3482 ntTSL 2 BASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 RNU2-50P-201ENST00000410494 143 ntBASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 AC244157.1-201ENST00000415642 163 ntBASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 CHEK2P5-201ENST00000423877 246 ntBASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 DNAJC27-AS1-205ENST00000434897 4660 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 AC006466.1-201ENST00000438721 289 ntBASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 RPS29P7-201ENST00000439662 171 ntBASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 AL356535.1-201ENST00000440335 398 ntBASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 PEG10-202ENST00000482108 6618 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 CBX1-205ENST00000495350 550 ntTSL 2 BASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 CORIN-202ENST00000502252 3112 ntAPPRIS ALT2 TSL 2 BASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 PALLD-206ENST00000505667 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 AC018797.1-201ENST00000510791 255 ntBASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 SCARNA6-201ENST00000515982 265 ntBASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 SNORD19.2-201ENST00000516978 73 ntBASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 AC044836.1-201ENST00000519514 274 ntBASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 IGHVIII-25-1-201ENST00000522143 241 ntBASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 OR7E96P-201ENST00000530816 976 ntBASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 HSPE1P5-201ENST00000561489 272 ntBASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 MIR4286-201ENST00000580651 93 ntBASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 MIR548AR-201ENST00000582191 57 ntBASIC2.04□□□□□ -2.08
KRTAP4-11Q9BYQ6 LAMA3-207ENST00000587184 5007 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms