Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 RNU6-174P-201ENST00000410406 106 ntBASIC4.83□□□□□ -1.64
GRIK1P39086 RNU6-293P-201ENST00000411259 106 ntBASIC4.83□□□□□ -1.64
GRIK1P39086 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.83□□□□□ -1.64
GRIK1P39086 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.83□□□□□ -1.64
GRIK1P39086 AC073587.1-201ENST00000447093 876 ntBASIC4.83□□□□□ -1.64
GRIK1P39086 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC4.83□□□□□ -1.64
GRIK1P39086 RPL36AP13-201ENST00000457490 317 ntBASIC4.83□□□□□ -1.64
GRIK1P39086 SNORD121B-201ENST00000458838 81 ntBASIC4.83□□□□□ -1.64
GRIK1P39086 AC020890.1-201ENST00000491837 504 ntBASIC4.83□□□□□ -1.64
GRIK1P39086 AC018437.1-201ENST00000492214 406 ntBASIC4.83□□□□□ -1.64
GRIK1P39086 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC4.83□□□□□ -1.64
GRIK1P39086 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.83□□□□□ -1.64
GRIK1P39086 IGKV2-23-201ENST00000518729 323 ntBASIC4.83□□□□□ -1.64
GRIK1P39086 AC034114.1-201ENST00000520293 285 ntBASIC4.83□□□□□ -1.64
GRIK1P39086 AC007991.1-201ENST00000522680 631 ntBASIC4.83□□□□□ -1.64
GRIK1P39086 MIR4277-201ENST00000578298 84 ntBASIC4.83□□□□□ -1.64
GRIK1P39086 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.83□□□□□ -1.64
GRIK1P39086 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.83□□□□□ -1.64
GRIK1P39086 AL138889.2-201ENST00000603883 242 ntBASIC4.83□□□□□ -1.64
GRIK1P39086 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
GRIK1P39086 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
GRIK1P39086 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.82□□□□□ -1.64
GRIK1P39086 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
GRIK1P39086 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
GRIK1P39086 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
GRIK1P39086 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
GRIK1P39086 AC006971.1-201ENST00000407916 4486 ntBASIC4.82□□□□□ -1.64
GRIK1P39086 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
GRIK1P39086 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
GRIK1P39086 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
GRIK1P39086 SDHCP2-201ENST00000398565 501 ntBASIC4.82□□□□□ -1.64
GRIK1P39086 RNU6-387P-201ENST00000411331 105 ntBASIC4.82□□□□□ -1.64
GRIK1P39086 RPL21P24-201ENST00000413752 448 ntBASIC4.82□□□□□ -1.64
GRIK1P39086 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.82□□□□□ -1.64
GRIK1P39086 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.82□□□□□ -1.64
GRIK1P39086 RPL7AP25-201ENST00000423357 805 ntBASIC4.82□□□□□ -1.64
GRIK1P39086 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.82□□□□□ -1.64
GRIK1P39086 AC009963.2-201ENST00000453431 138 ntBASIC4.82□□□□□ -1.64
GRIK1P39086 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.82□□□□□ -1.64
GRIK1P39086 AL136097.1-201ENST00000456945 913 ntBASIC4.82□□□□□ -1.64
GRIK1P39086 RPL21P126-201ENST00000470049 478 ntBASIC4.82□□□□□ -1.64
GRIK1P39086 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.82□□□□□ -1.64
GRIK1P39086 AC004584.2-201ENST00000570407 410 ntBASIC4.82□□□□□ -1.64
GRIK1P39086 AL158032.1-201ENST00000605401 106 ntBASIC4.82□□□□□ -1.64
GRIK1P39086 BX284668.6-201ENST00000606899 438 ntBASIC4.82□□□□□ -1.64
GRIK1P39086 AC006023.2-201ENST00000609916 167 ntBASIC4.82□□□□□ -1.64
GRIK1P39086 DLEU2_2.2-201ENST00000615474 90 ntBASIC4.82□□□□□ -1.64
GRIK1P39086 AL589994.2-201ENST00000621124 579 ntBASIC4.82□□□□□ -1.64
GRIK1P39086 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.82□□□□□ -1.64
GRIK1P39086 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.82□□□□□ -1.64
GRIK1P39086 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
GRIK1P39086 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.82□□□□□ -1.64
GRIK1P39086 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
GRIK1P39086 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
GRIK1P39086 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
GRIK1P39086 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
GRIK1P39086 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
GRIK1P39086 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
GRIK1P39086 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.81□□□□□ -1.64
GRIK1P39086 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
GRIK1P39086 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
GRIK1P39086 AC139713.2-215ENST00000641428 5037 ntBASIC4.81□□□□□ -1.64
GRIK1P39086 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.81□□□□□ -1.64
GRIK1P39086 ZNF285B-201ENST00000561698 1767 ntBASIC4.81□□□□□ -1.64
GRIK1P39086 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
GRIK1P39086 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
GRIK1P39086 Y_RNA.199-201ENST00000364014 102 ntBASIC4.81□□□□□ -1.64
GRIK1P39086 MIR659-201ENST00000384963 97 ntBASIC4.81□□□□□ -1.64
GRIK1P39086 SNORD73A-201ENST00000386062 65 ntBASIC4.81□□□□□ -1.64
GRIK1P39086 AL592291.1-201ENST00000403830 352 ntBASIC4.81□□□□□ -1.64
GRIK1P39086 U3.42-201ENST00000408746 214 ntBASIC4.81□□□□□ -1.64
GRIK1P39086 RNA5SP111-201ENST00000411386 101 ntBASIC4.81□□□□□ -1.64
GRIK1P39086 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.81□□□□□ -1.64
GRIK1P39086 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC4.81□□□□□ -1.64
GRIK1P39086 EIF4EP2-201ENST00000422816 654 ntBASIC4.81□□□□□ -1.64
GRIK1P39086 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.81□□□□□ -1.64
GRIK1P39086 AL645568.3-201ENST00000433683 316 ntBASIC4.81□□□□□ -1.64
GRIK1P39086 PPIAP3-201ENST00000450588 505 ntBASIC4.81□□□□□ -1.64
GRIK1P39086 FABP5P13-201ENST00000452144 328 ntBASIC4.81□□□□□ -1.64
GRIK1P39086 AC053481.1-201ENST00000467217 306 ntBASIC4.81□□□□□ -1.64
GRIK1P39086 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.81□□□□□ -1.64
GRIK1P39086 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.81□□□□□ -1.64
GRIK1P39086 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.81□□□□□ -1.64
GRIK1P39086 RNU7-200P-201ENST00000516105 62 ntBASIC4.81□□□□□ -1.64
GRIK1P39086 IGHVII-53-1-201ENST00000519538 255 ntBASIC4.81□□□□□ -1.64
GRIK1P39086 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.81□□□□□ -1.64
GRIK1P39086 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.81□□□□□ -1.64
GRIK1P39086 AL356218.2-201ENST00000605264 187 ntBASIC4.81□□□□□ -1.64
GRIK1P39086 SNORD91B-202ENST00000608459 222 ntBASIC4.81□□□□□ -1.64
GRIK1P39086 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
GRIK1P39086 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
GRIK1P39086 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
GRIK1P39086 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
GRIK1P39086 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
GRIK1P39086 AC025031.4-201ENST00000621248 3271 ntBASIC4.8□□□□□ -1.64
GRIK1P39086 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
GRIK1P39086 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
GRIK1P39086 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.8□□□□□ -1.64
GRIK1P39086 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
GRIK1P39086 RLIMP1-201ENST00000339626 1680 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms