RNA–Protein interactions for RNA: ENST00000429317.1

LINC01817-201, Transcript of long intergenic non-protein coding RNA 1817, humanhuman

TSL 4 BASIC

Gene LINC01817, Length 564 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01817-201ENST00000429317 AEBP2Q6ZN18 517 aaPredicted RBP17.39■□□□□ 0.37
LINC01817-201ENST00000429317 CHIC1Q5VXU3 224 aa16.23■□□□□ 0.19
LINC01817-201ENST00000429317 SENP3Q9H4L4 574 aaPredicted RBP14.99□□□□□ -0.01
LINC01817-201ENST00000429317 POTEDQ86YR6 584 aa14.72□□□□□ -0.05
LINC01817-201ENST00000429317 PHF23Q9BUL5 403 aaPredicted RBP14.61□□□□□ -0.07
LINC01817-201ENST00000429317 FOXD1Q16676 465 aa14□□□□□ -0.17
LINC01817-201ENST00000429317 MSH5O43196 834 aa13.55□□□□□ -0.24
LINC01817-201ENST00000429317 PIAS4Q8N2W9 510 aaPredicted RBP12.88□□□□□ -0.35
LINC01817-201ENST00000429317 PLPPR3Q6T4P5 718 aa12.64□□□□□ -0.39
LINC01817-201ENST00000429317 PPP6R1Q9UPN7 881 aa12.56□□□□□ -0.4
LINC01817-201ENST00000429317 ADRA2BP18089 450 aa12.45□□□□□ -0.42
LINC01817-201ENST00000429317 CACNB1Q02641 598 aaPredicted RBP12.13□□□□□ -0.47
LINC01817-201ENST00000429317 DMRT2Q9Y5R5 561 aa11.75□□□□□ -0.53
LINC01817-201ENST00000429317 MAPK8IP2Q13387 824 aaPredicted RBP11.64□□□□□ -0.55
LINC01817-201ENST00000429317 RNF39Q9H2S5 420 aa11.44□□□□□ -0.58
LINC01817-201ENST00000429317 POTEHQ6S545 545 aa11.37□□□□□ -0.59
LINC01817-201ENST00000429317 SCAF1Q9H7N4 1312 aaKnown RBP11.36□□□□□ -0.59
LINC01817-201ENST00000429317 C1QBPQ07021 282 aaKnown RBP11.27□□□□□ -0.61
LINC01817-201ENST00000429317 KCNA4P22459 653 aa11.24□□□□□ -0.61
LINC01817-201ENST00000429317 PPP4R3CPQ6ZMV5 832 aa11.23□□□□□ -0.61
LINC01817-201ENST00000429317 DCAF8L1A6NGE4 600 aa11.19□□□□□ -0.62
LINC01817-201ENST00000429317 HOXD11P31277 338 aaPredicted RBP11.05□□□□□ -0.64
LINC01817-201ENST00000429317 NPM3O75607 178 aaKnown RBP10.86□□□□□ -0.67
LINC01817-201ENST00000429317 DNAJC5BQ9UF47 199 aa10.86□□□□□ -0.67
LINC01817-201ENST00000429317 NCBP3Q53F19 620 aaKnown RBP10.84□□□□□ -0.67
LINC01817-201ENST00000429317 CNKSR2Q8WXI2 1034 aa10.8□□□□□ -0.68
LINC01817-201ENST00000429317 RNF216Q9NWF9 866 aaPredicted RBP10.75□□□□□ -0.69
LINC01817-201ENST00000429317 EHMT2Q96KQ7 1210 aa10.68□□□□□ -0.7
LINC01817-201ENST00000429317 SLC4A1APQ9BWU0 796 aaKnown RBP10.66□□□□□ -0.7
LINC01817-201ENST00000429317 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.45□□□□□ -0.74
LINC01817-201ENST00000429317 ZBTB22O15209 634 aa10.41□□□□□ -0.74
LINC01817-201ENST00000429317 DSG3P32926 999 aa10.39□□□□□ -0.75
LINC01817-201ENST00000429317 CSRNP3Q8WYN3 585 aa10.38□□□□□ -0.75
LINC01817-201ENST00000429317 SPINK5Q9NQ38 1064 aaPredicted RBP10.25□□□□□ -0.77
LINC01817-201ENST00000429317 SLC4A2P04920 1241 aa10.23□□□□□ -0.77
LINC01817-201ENST00000429317 SP7Q8TDD2 431 aaPredicted RBP10.23□□□□□ -0.77
LINC01817-201ENST00000429317 CAPN15O75808 1086 aa10.22□□□□□ -0.77
LINC01817-201ENST00000429317 U3KPZ7 1027 aaPredicted RBP10.21□□□□□ -0.77
LINC01817-201ENST00000429317 FOXD4L1Q9NU39 408 aa10.2□□□□□ -0.78
LINC01817-201ENST00000429317 CHRDL2Q6WN34 429 aa10.09□□□□□ -0.79
LINC01817-201ENST00000429317 RBM42Q9BTD8 480 aaKnown RBP10□□□□□ -0.81
LINC01817-201ENST00000429317 MYCNP04198 464 aaPredicted RBP9.95□□□□□ -0.82
LINC01817-201ENST00000429317 ABCB7O75027 752 aa9.93□□□□□ -0.82
LINC01817-201ENST00000429317 TRHP20396 242 aaPredicted RBP9.88□□□□□ -0.83
LINC01817-201ENST00000429317 ZNF219Q9P2Y4 722 aaPredicted RBP9.88□□□□□ -0.83
LINC01817-201ENST00000429317 ATF5Q9Y2D1 282 aaPredicted RBP9.85□□□□□ -0.83
LINC01817-201ENST00000429317 APLP2Q06481 763 aa9.8□□□□□ -0.84
LINC01817-201ENST00000429317 HAX1O00165 279 aa9.7□□□□□ -0.86
LINC01817-201ENST00000429317 ATXN8OSP0DMR3 200 aa9.69□□□□□ -0.86
LINC01817-201ENST00000429317 SAMD1Q6SPF0 538 aaPredicted RBP9.69□□□□□ -0.86
LINC01817-201ENST00000429317 PLSCR2Q9NRY7 297 aa9.68□□□□□ -0.86
LINC01817-201ENST00000429317 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.65□□□□□ -0.86
LINC01817-201ENST00000429317 HNRNPUL2Q1KMD3 747 aaKnown RBP9.65□□□□□ -0.86
LINC01817-201ENST00000429317 PIP4P2Q8N4L2 257 aa9.63□□□□□ -0.87
LINC01817-201ENST00000429317 LHX8Q68G74 356 aa9.58□□□□□ -0.88
LINC01817-201ENST00000429317 AKT1S1Q96B36 256 aa9.56□□□□□ -0.88
LINC01817-201ENST00000429317 POLA2Q14181 598 aa9.49□□□□□ -0.89
LINC01817-201ENST00000429317 FXR2P51116 673 aaKnown RBP eCLIP9.47□□□□□ -0.89
LINC01817-201ENST00000429317 EVX2Q03828 476 aa9.46□□□□□ -0.9
LINC01817-201ENST00000429317 REM2Q8IYK8 340 aaPredicted RBP9.46□□□□□ -0.9
LINC01817-201ENST00000429317 FKBP8Q14318 412 aa9.4□□□□□ -0.9
LINC01817-201ENST00000429317 MKRN4PQ13434 485 aaPredicted RBP9.38□□□□□ -0.91
LINC01817-201ENST00000429317 PITPNM1O00562 1244 aa9.37□□□□□ -0.91
LINC01817-201ENST00000429317 GABBR2O75899 941 aa9.26□□□□□ -0.93
LINC01817-201ENST00000429317 ZBTB12Q9Y330 459 aaPredicted RBP9.26□□□□□ -0.93
LINC01817-201ENST00000429317 OSCARQ8IYS5 282 aa9.23□□□□□ -0.93
LINC01817-201ENST00000429317 FBLN2P98095 1184 aa9.22□□□□□ -0.93
LINC01817-201ENST00000429317 C19orf67A6NJJ6 358 aa9.19□□□□□ -0.94
LINC01817-201ENST00000429317 SPDYE4A6NLX3 237 aa9.17□□□□□ -0.94
LINC01817-201ENST00000429317 PRKAR2AP13861 404 aaKnown RBP9.09□□□□□ -0.95
LINC01817-201ENST00000429317 PCDH10Q9P2E7 1040 aa9.09□□□□□ -0.95
LINC01817-201ENST00000429317 POTEMA6NI47 508 aa9.05□□□□□ -0.96
LINC01817-201ENST00000429317 POTEIP0CG38 1075 aa9.02□□□□□ -0.97
LINC01817-201ENST00000429317 POTEGQ6S5H5 508 aa8.99□□□□□ -0.97
LINC01817-201ENST00000429317 PROM2Q8N271 834 aa8.99□□□□□ -0.97
LINC01817-201ENST00000429317 ZNF692Q9BU19 519 aaPredicted RBP8.99□□□□□ -0.97
LINC01817-201ENST00000429317 CLCN6P51797 869 aa8.96□□□□□ -0.98
LINC01817-201ENST00000429317 SSUH2Q9Y2M2 353 aa8.95□□□□□ -0.98
LINC01817-201ENST00000429317 SPDYE2BA6NHP3 402 aa8.94□□□□□ -0.98
LINC01817-201ENST00000429317 SPDYE6P0CI01 402 aa8.94□□□□□ -0.98
LINC01817-201ENST00000429317 SPDYE2Q495Y8 402 aa8.94□□□□□ -0.98
LINC01817-201ENST00000429317 PABPN1Q86U42 306 aaKnown RBP eCLIP8.93□□□□□ -0.98
LINC01817-201ENST00000429317 SPDYE1Q8NFV5 336 aaPredicted RBP8.92□□□□□ -0.98
LINC01817-201ENST00000429317 OTUD5Q96G74 571 aa8.89□□□□□ -0.99
LINC01817-201ENST00000429317 CLEC11AQ9Y240 323 aa8.89□□□□□ -0.99
LINC01817-201ENST00000429317 RTN4Q9NQC3 1192 aaKnown RBP8.87□□□□□ -0.99
LINC01817-201ENST00000429317 VASPP50552 380 aaPredicted RBP8.84□□□□□ -0.99
LINC01817-201ENST00000429317 CHADLQ6NUI6 762 aa8.82□□□□□ -1
LINC01817-201ENST00000429317 DCBLD2Q96PD2 775 aa8.82□□□□□ -1
LINC01817-201ENST00000429317 FBXO3Q9UK99 471 aa8.82□□□□□ -1
LINC01817-201ENST00000429317 IFNLR1Q8IU57 520 aaPredicted RBP8.77□□□□□ -1.01
LINC01817-201ENST00000429317 CD44P16070 742 aaKnown RBP8.76□□□□□ -1.01
LINC01817-201ENST00000429317 AMER1Q5JTC6 1135 aaPredicted RBP8.71□□□□□ -1.02
LINC01817-201ENST00000429317 POTEB2H3BUK9 544 aa8.69□□□□□ -1.02
LINC01817-201ENST00000429317 PLCD3Q8N3E9 789 aa8.67□□□□□ -1.02
LINC01817-201ENST00000429317 PRR29P0C7W0 189 aa8.66□□□□□ -1.02
LINC01817-201ENST00000429317 MIER1Q8N108 512 aa8.65□□□□□ -1.02
LINC01817-201ENST00000429317 FARP1Q9Y4F1 1045 aaPredicted RBP8.65□□□□□ -1.02
LINC01817-201ENST00000429317 STAG3Q9UJ98 1225 aa8.64□□□□□ -1.03
LINC01817-201ENST00000429317 KLHL34Q8N239 644 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms