RNA–Protein interactions for RNA: ENST00000408746.2

U3.42-201, humanhuman

BASIC

Gene U3, Length 214 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U3.42-201ENST00000408746 AEBP2Q6ZN18 517 aaPredicted RBP15.79■□□□□ 0.12
U3.42-201ENST00000408746 CHIC1Q5VXU3 224 aa15.26■□□□□ 0.03
U3.42-201ENST00000408746 SENP3Q9H4L4 574 aaPredicted RBP13.57□□□□□ -0.24
U3.42-201ENST00000408746 PHF23Q9BUL5 403 aaPredicted RBP13.41□□□□□ -0.26
U3.42-201ENST00000408746 FOXD1Q16676 465 aa12.55□□□□□ -0.4
U3.42-201ENST00000408746 PLPPR3Q6T4P5 718 aa12.37□□□□□ -0.43
U3.42-201ENST00000408746 ADRA2BP18089 450 aa11.9□□□□□ -0.5
U3.42-201ENST00000408746 PPP6R1Q9UPN7 881 aa11.87□□□□□ -0.51
U3.42-201ENST00000408746 PIAS4Q8N2W9 510 aaPredicted RBP11.85□□□□□ -0.51
U3.42-201ENST00000408746 MSH5O43196 834 aa11.75□□□□□ -0.53
U3.42-201ENST00000408746 POTEDQ86YR6 584 aa11.03□□□□□ -0.64
U3.42-201ENST00000408746 SCAF1Q9H7N4 1312 aaKnown RBP11.03□□□□□ -0.64
U3.42-201ENST00000408746 MAPK8IP2Q13387 824 aaPredicted RBP10.86□□□□□ -0.67
U3.42-201ENST00000408746 PPP4R3CPQ6ZMV5 832 aa10.84□□□□□ -0.67
U3.42-201ENST00000408746 DMRT2Q9Y5R5 561 aa10.74□□□□□ -0.69
U3.42-201ENST00000408746 CNKSR2Q8WXI2 1034 aa10.61□□□□□ -0.71
U3.42-201ENST00000408746 NCBP3Q53F19 620 aaKnown RBP10.59□□□□□ -0.71
U3.42-201ENST00000408746 DCAF8L1A6NGE4 600 aa10.45□□□□□ -0.74
U3.42-201ENST00000408746 RNF216Q9NWF9 866 aaPredicted RBP10.44□□□□□ -0.74
U3.42-201ENST00000408746 HOXD11P31277 338 aaPredicted RBP10.41□□□□□ -0.74
U3.42-201ENST00000408746 NPM3O75607 178 aaKnown RBP10.3□□□□□ -0.76
U3.42-201ENST00000408746 KCNA4P22459 653 aa10.29□□□□□ -0.76
U3.42-201ENST00000408746 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.06□□□□□ -0.8
U3.42-201ENST00000408746 DNAJC5BQ9UF47 199 aa10.02□□□□□ -0.81
U3.42-201ENST00000408746 CACNB1Q02641 598 aaPredicted RBP10□□□□□ -0.81
U3.42-201ENST00000408746 RNF39Q9H2S5 420 aa9.97□□□□□ -0.81
U3.42-201ENST00000408746 C1QBPQ07021 282 aaKnown RBP9.91□□□□□ -0.82
U3.42-201ENST00000408746 SLC4A1APQ9BWU0 796 aaKnown RBP9.83□□□□□ -0.84
U3.42-201ENST00000408746 SLC4A2P04920 1241 aa9.74□□□□□ -0.85
U3.42-201ENST00000408746 U3KPZ7 1027 aaPredicted RBP9.73□□□□□ -0.85
U3.42-201ENST00000408746 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.69□□□□□ -0.86
U3.42-201ENST00000408746 HNRNPUL2Q1KMD3 747 aaKnown RBP9.69□□□□□ -0.86
U3.42-201ENST00000408746 APLP2Q06481 763 aa9.66□□□□□ -0.86
U3.42-201ENST00000408746 CAPN15O75808 1086 aa9.63□□□□□ -0.87
U3.42-201ENST00000408746 SAMD1Q6SPF0 538 aaPredicted RBP9.6□□□□□ -0.87
U3.42-201ENST00000408746 MYCNP04198 464 aaPredicted RBP9.58□□□□□ -0.88
U3.42-201ENST00000408746 FOXD4L1Q9NU39 408 aa9.58□□□□□ -0.88
U3.42-201ENST00000408746 SPINK5Q9NQ38 1064 aaPredicted RBP9.56□□□□□ -0.88
U3.42-201ENST00000408746 TRHP20396 242 aaPredicted RBP9.53□□□□□ -0.88
U3.42-201ENST00000408746 ZNF219Q9P2Y4 722 aaPredicted RBP9.5□□□□□ -0.89
U3.42-201ENST00000408746 DSG3P32926 999 aa9.42□□□□□ -0.9
U3.42-201ENST00000408746 ZBTB22O15209 634 aa9.39□□□□□ -0.91
U3.42-201ENST00000408746 ABCB7O75027 752 aa9.37□□□□□ -0.91
U3.42-201ENST00000408746 POLA2Q14181 598 aa9.3□□□□□ -0.92
U3.42-201ENST00000408746 EHMT2Q96KQ7 1210 aa9.3□□□□□ -0.92
U3.42-201ENST00000408746 ATXN8OSP0DMR3 200 aa9.27□□□□□ -0.93
U3.42-201ENST00000408746 ATF5Q9Y2D1 282 aaPredicted RBP9.25□□□□□ -0.93
U3.42-201ENST00000408746 CSRNP3Q8WYN3 585 aa9.21□□□□□ -0.94
U3.42-201ENST00000408746 ZBTB12Q9Y330 459 aaPredicted RBP9.15□□□□□ -0.94
U3.42-201ENST00000408746 RBM42Q9BTD8 480 aaKnown RBP9.08□□□□□ -0.96
U3.42-201ENST00000408746 FBLN2P98095 1184 aa9.04□□□□□ -0.96
U3.42-201ENST00000408746 OSCARQ8IYS5 282 aa8.93□□□□□ -0.98
U3.42-201ENST00000408746 AKT1S1Q96B36 256 aa8.88□□□□□ -0.99
U3.42-201ENST00000408746 SPDYE2BA6NHP3 402 aa8.84□□□□□ -0.99
U3.42-201ENST00000408746 SPDYE6P0CI01 402 aa8.84□□□□□ -0.99
U3.42-201ENST00000408746 SPDYE2Q495Y8 402 aa8.84□□□□□ -0.99
U3.42-201ENST00000408746 ZNF692Q9BU19 519 aaPredicted RBP8.83□□□□□ -1
U3.42-201ENST00000408746 MKRN4PQ13434 485 aaPredicted RBP8.82□□□□□ -1
U3.42-201ENST00000408746 REM2Q8IYK8 340 aaPredicted RBP8.78□□□□□ -1
U3.42-201ENST00000408746 CHRDL2Q6WN34 429 aa8.75□□□□□ -1.01
U3.42-201ENST00000408746 POTEHQ6S545 545 aa8.72□□□□□ -1.01
U3.42-201ENST00000408746 CLEC11AQ9Y240 323 aa8.69□□□□□ -1.02
U3.42-201ENST00000408746 SPDYE1Q8NFV5 336 aaPredicted RBP8.67□□□□□ -1.02
U3.42-201ENST00000408746 SSUH2Q9Y2M2 353 aa8.67□□□□□ -1.02
U3.42-201ENST00000408746 PABPN1Q86U42 306 aaKnown RBP eCLIP8.66□□□□□ -1.02
U3.42-201ENST00000408746 PITPNM1O00562 1244 aa8.65□□□□□ -1.02
U3.42-201ENST00000408746 SPDYE4A6NLX3 237 aa8.63□□□□□ -1.03
U3.42-201ENST00000408746 PRR29P0C7W0 189 aa8.57□□□□□ -1.04
U3.42-201ENST00000408746 PIP4P2Q8N4L2 257 aa8.55□□□□□ -1.04
U3.42-201ENST00000408746 STAG3Q9UJ98 1225 aa8.53□□□□□ -1.04
U3.42-201ENST00000408746 FXR2P51116 673 aaKnown RBP eCLIP8.52□□□□□ -1.05
U3.42-201ENST00000408746 PRKAR2AP13861 404 aaKnown RBP8.49□□□□□ -1.05
U3.42-201ENST00000408746 HAX1O00165 279 aa8.46□□□□□ -1.06
U3.42-201ENST00000408746 FKBP8Q14318 412 aa8.42□□□□□ -1.06
U3.42-201ENST00000408746 CHADLQ6NUI6 762 aa8.41□□□□□ -1.06
U3.42-201ENST00000408746 PLEKHG5O94827 1062 aa8.34□□□□□ -1.07
U3.42-201ENST00000408746 PROM2Q8N271 834 aa8.32□□□□□ -1.08
U3.42-201ENST00000408746 FARP1Q9Y4F1 1045 aaPredicted RBP8.32□□□□□ -1.08
U3.42-201ENST00000408746 MIER1Q8N108 512 aa8.29□□□□□ -1.08
U3.42-201ENST00000408746 NPM1P06748 294 aaKnown RBP eCLIP8.28□□□□□ -1.08
U3.42-201ENST00000408746 SP7Q8TDD2 431 aaPredicted RBP8.28□□□□□ -1.08
U3.42-201ENST00000408746 CREBZFQ9NS37 354 aa8.28□□□□□ -1.08
U3.42-201ENST00000408746 PLCD3Q8N3E9 789 aa8.26□□□□□ -1.09
U3.42-201ENST00000408746 FBXO3Q9UK99 471 aa8.26□□□□□ -1.09
U3.42-201ENST00000408746 C19orf67A6NJJ6 358 aa8.24□□□□□ -1.09
U3.42-201ENST00000408746 PAK3O75914 559 aaPredicted RBP8.23□□□□□ -1.09
U3.42-201ENST00000408746 CD44P16070 742 aaKnown RBP8.23□□□□□ -1.09
U3.42-201ENST00000408746 EVX2Q03828 476 aa8.21□□□□□ -1.1
U3.42-201ENST00000408746 ZBTB47Q9UFB7 747 aaPredicted RBP8.18□□□□□ -1.1
U3.42-201ENST00000408746 ZRANB1Q9UGI0 708 aa8.16□□□□□ -1.1
U3.42-201ENST00000408746 CLCN6P51797 869 aa8.13□□□□□ -1.11
U3.42-201ENST00000408746 MNX1P50219 401 aaPredicted RBP8.12□□□□□ -1.11
U3.42-201ENST00000408746 KLHL34Q8N239 644 aa8.11□□□□□ -1.11
U3.42-201ENST00000408746 GABBR2O75899 941 aa8.1□□□□□ -1.11
U3.42-201ENST00000408746 TSPYL2Q9H2G4 693 aaPredicted RBP8.1□□□□□ -1.11
U3.42-201ENST00000408746 ZNF579Q8NAF0 562 aaKnown RBP8.06□□□□□ -1.12
U3.42-201ENST00000408746 VASPP50552 380 aaPredicted RBP8.05□□□□□ -1.12
U3.42-201ENST00000408746 DCBLD2Q96PD2 775 aa8.04□□□□□ -1.12
U3.42-201ENST00000408746 FAM212AQ96EL1 285 aa8.01□□□□□ -1.13
U3.42-201ENST00000408746 PHF12Q96QT6 1004 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms