RNA–Protein interactions for RNA: ENST00000301480.4

ZNF560-201, Transcript of zinc finger protein 560, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF560, Length 2,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560-201ENST00000301480 AEBP2Q6ZN18 517 aaPredicted RBP11.33□□□□□ -0.59
ZNF560-201ENST00000301480 CHIC1Q5VXU3 224 aa10.82□□□□□ -0.68
ZNF560-201ENST00000301480 NISCHQ9Y2I1 1504 aa10.15□□□□□ -0.79
ZNF560-201ENST00000301480 SENP3Q9H4L4 574 aaPredicted RBP9.93□□□□□ -0.82
ZNF560-201ENST00000301480 POTEDQ86YR6 584 aa9.84□□□□□ -0.83
ZNF560-201ENST00000301480 PHF23Q9BUL5 403 aaPredicted RBP9.66□□□□□ -0.86
ZNF560-201ENST00000301480 CCDC180Q9P1Z9 1646 aa9.18□□□□□ -0.94
ZNF560-201ENST00000301480 FOXD1Q16676 465 aa9.17□□□□□ -0.94
ZNF560-201ENST00000301480 ABCC9O60706 1549 aa8.99□□□□□ -0.97
ZNF560-201ENST00000301480 SLC24A1O60721 1099 aa8.93□□□□□ -0.98
ZNF560-201ENST00000301480 MSH5O43196 834 aa8.88□□□□□ -0.99
ZNF560-201ENST00000301480 RB1CC1Q8TDY2 1594 aa8.72□□□□□ -1.01
ZNF560-201ENST00000301480 NACADO15069 1562 aa8.69□□□□□ -1.02
ZNF560-201ENST00000301480 MYO15BQ96JP2 1530 aa8.66□□□□□ -1.02
ZNF560-201ENST00000301480 PIAS4Q8N2W9 510 aaPredicted RBP8.52□□□□□ -1.05
ZNF560-201ENST00000301480 DCAF1Q9Y4B6 1507 aa8.52□□□□□ -1.05
ZNF560-201ENST00000301480 SHROOM4Q9ULL8 1493 aa8.51□□□□□ -1.05
ZNF560-201ENST00000301480 MYT1Q01538 1121 aa8.43□□□□□ -1.06
ZNF560-201ENST00000301480 ZCCHC6Q5VYS8 1495 aaKnown RBP8.42□□□□□ -1.06
ZNF560-201ENST00000301480 DNAJC5BQ9UF47 199 aa8.39□□□□□ -1.07
ZNF560-201ENST00000301480 PELP1Q8IZL8 1130 aaKnown RBP8.39□□□□□ -1.07
ZNF560-201ENST00000301480 DCAF8L2P0C7V8 631 aa8.37□□□□□ -1.07
ZNF560-201ENST00000301480 BICRAQ9NZM4 1560 aa8.37□□□□□ -1.07
ZNF560-201ENST00000301480 PRKCSHP14314 528 aaPredicted RBP8.37□□□□□ -1.07
ZNF560-201ENST00000301480 UNC13AQ9UPW8 1703 aa8.36□□□□□ -1.07
ZNF560-201ENST00000301480 PLPPR3Q6T4P5 718 aa8.33□□□□□ -1.08
ZNF560-201ENST00000301480 PABPN1Q86U42 306 aaKnown RBP eCLIP8.33□□□□□ -1.08
ZNF560-201ENST00000301480 TTBK1Q5TCY1 1321 aaPredicted RBP8.29□□□□□ -1.08
ZNF560-201ENST00000301480 DAXXQ9UER7 740 aaPredicted RBP8.26□□□□□ -1.09
ZNF560-201ENST00000301480 APLP2Q06481 763 aa8.23□□□□□ -1.09
ZNF560-201ENST00000301480 PPP6R1Q9UPN7 881 aa8.21□□□□□ -1.1
ZNF560-201ENST00000301480 ADRA2BP18089 450 aa8.2□□□□□ -1.1
ZNF560-201ENST00000301480 EIF4G1Q04637 1599 aaKnown RBP8.19□□□□□ -1.1
ZNF560-201ENST00000301480 SCRIBQ14160 1630 aa8.18□□□□□ -1.1
ZNF560-201ENST00000301480 CC2D2AQ9P2K1 1620 aa8.18□□□□□ -1.1
ZNF560-201ENST00000301480 CECR2Q9BXF3 1484 aa8.18□□□□□ -1.1
ZNF560-201ENST00000301480 ERICH6Q7L0X2 663 aa8.12□□□□□ -1.11
ZNF560-201ENST00000301480 NCAPD3P42695 1498 aa8.01□□□□□ -1.13
ZNF560-201ENST00000301480 SMARCA2P51531 1590 aa7.96□□□□□ -1.14
ZNF560-201ENST00000301480 HMGXB3Q12766 1538 aa7.95□□□□□ -1.14
ZNF560-201ENST00000301480 EHMT2Q96KQ7 1210 aa7.94□□□□□ -1.14
ZNF560-201ENST00000301480 CUX2O14529 1486 aa7.94□□□□□ -1.14
ZNF560-201ENST00000301480 DNAJC5Q9H3Z4 198 aa7.94□□□□□ -1.14
ZNF560-201ENST00000301480 ATAD2BQ9ULI0 1458 aa7.92□□□□□ -1.14
ZNF560-201ENST00000301480 PEG3Q9GZU2 1588 aa7.91□□□□□ -1.14
ZNF560-201ENST00000301480 BAZ1AQ9NRL2 1556 aaPredicted RBP7.91□□□□□ -1.14
ZNF560-201ENST00000301480 SMARCA4P51532 1647 aa7.89□□□□□ -1.15
ZNF560-201ENST00000301480 NCBP3Q53F19 620 aaKnown RBP7.88□□□□□ -1.15
ZNF560-201ENST00000301480 RTN4Q9NQC3 1192 aaKnown RBP7.88□□□□□ -1.15
ZNF560-201ENST00000301480 BAZ1BQ9UIG0 1483 aaKnown RBP7.84□□□□□ -1.15
ZNF560-201ENST00000301480 ERCC6Q03468 1493 aa7.83□□□□□ -1.16
ZNF560-201ENST00000301480 LAMC3Q9Y6N6 1575 aa7.82□□□□□ -1.16
ZNF560-201ENST00000301480 PDS5BQ9NTI5 1447 aa7.79□□□□□ -1.16
ZNF560-201ENST00000301480 DMRT2Q9Y5R5 561 aa7.78□□□□□ -1.16
ZNF560-201ENST00000301480 CACNB1Q02641 598 aaPredicted RBP7.78□□□□□ -1.16
ZNF560-201ENST00000301480 EIF5BO60841 1220 aaKnown RBP7.76□□□□□ -1.17
ZNF560-201ENST00000301480 SCAF1Q9H7N4 1312 aaKnown RBP7.76□□□□□ -1.17
ZNF560-201ENST00000301480 MROH2BQ7Z745 1585 aa7.74□□□□□ -1.17
ZNF560-201ENST00000301480 CADPSQ9ULU8 1353 aa7.73□□□□□ -1.17
ZNF560-201ENST00000301480 THOC2Q8NI27 1593 aaKnown RBP7.72□□□□□ -1.17
ZNF560-201ENST00000301480 NESP48681 1621 aa7.69□□□□□ -1.18
ZNF560-201ENST00000301480 BCL11AQ9H165 835 aa7.68□□□□□ -1.18
ZNF560-201ENST00000301480 MRC2Q9UBG0 1479 aa7.68□□□□□ -1.18
ZNF560-201ENST00000301480 WDR62O43379 1518 aa7.67□□□□□ -1.18
ZNF560-201ENST00000301480 TIMELESSQ9UNS1 1208 aa7.66□□□□□ -1.18
ZNF560-201ENST00000301480 PLEKHG5O94827 1062 aa7.65□□□□□ -1.18
ZNF560-201ENST00000301480 CFTRP13569 1480 aa7.65□□□□□ -1.19
ZNF560-201ENST00000301480 CEP164Q9UPV0 1460 aa7.63□□□□□ -1.19
ZNF560-201ENST00000301480 TOP2AP11388 1531 aaKnown RBP7.63□□□□□ -1.19
ZNF560-201ENST00000301480 ARXQ96QS3 562 aa7.63□□□□□ -1.19
ZNF560-201ENST00000301480 KIF21AQ7Z4S6 1674 aa7.62□□□□□ -1.19
ZNF560-201ENST00000301480 RSF1Q96T23 1441 aaPredicted RBP7.62□□□□□ -1.19
ZNF560-201ENST00000301480 MAPK8IP2Q13387 824 aaPredicted RBP7.61□□□□□ -1.19
ZNF560-201ENST00000301480 WIZO95785 1651 aa7.6□□□□□ -1.19
ZNF560-201ENST00000301480 FANCD2Q9BXW9 1451 aa7.6□□□□□ -1.19
ZNF560-201ENST00000301480 KLHL34Q8N239 644 aa7.6□□□□□ -1.19
ZNF560-201ENST00000301480 ABCC8Q09428 1581 aa7.58□□□□□ -1.2
ZNF560-201ENST00000301480 FAM9AQ8IZU1 332 aaPredicted RBP7.56□□□□□ -1.2
ZNF560-201ENST00000301480 PRDM2Q13029 1718 aa7.54□□□□□ -1.2
ZNF560-201ENST00000301480 IFT140Q96RY7 1462 aa7.52□□□□□ -1.21
ZNF560-201ENST00000301480 RANGAP1P46060 587 aaPredicted RBP7.51□□□□□ -1.21
ZNF560-201ENST00000301480 URB2Q14146 1524 aaKnown RBP7.51□□□□□ -1.21
ZNF560-201ENST00000301480 OSCARQ8IYS5 282 aa7.51□□□□□ -1.21
ZNF560-201ENST00000301480 TULP1O00294 542 aaPredicted RBP7.5□□□□□ -1.21
ZNF560-201ENST00000301480 CCDC88BA6NC98 1476 aa7.49□□□□□ -1.21
ZNF560-201ENST00000301480 WDR97A6NE52 1622 aa7.48□□□□□ -1.21
ZNF560-201ENST00000301480 AMER1Q5JTC6 1135 aaPredicted RBP7.48□□□□□ -1.21
ZNF560-201ENST00000301480 DNMBPQ6XZF7 1577 aa7.46□□□□□ -1.21
ZNF560-201ENST00000301480 TOPBP1Q92547 1522 aa7.45□□□□□ -1.22
ZNF560-201ENST00000301480 RNF39Q9H2S5 420 aa7.45□□□□□ -1.22
ZNF560-201ENST00000301480 DCAF8L1A6NGE4 600 aa7.44□□□□□ -1.22
ZNF560-201ENST00000301480 KCNA4P22459 653 aa7.41□□□□□ -1.22
ZNF560-201ENST00000301480 C1QBPQ07021 282 aaKnown RBP7.41□□□□□ -1.22
ZNF560-201ENST00000301480 POTEHQ6S545 545 aa7.4□□□□□ -1.22
ZNF560-201ENST00000301480 PODXL2Q9NZ53 605 aa7.39□□□□□ -1.23
ZNF560-201ENST00000301480 TARBP1Q13395 1621 aaKnown RBP7.39□□□□□ -1.23
ZNF560-201ENST00000301480 EIF4G3O43432 1585 aaKnown RBP7.37□□□□□ -1.23
ZNF560-201ENST00000301480 HOMEZQ8IX15 550 aa7.37□□□□□ -1.23
ZNF560-201ENST00000301480 ZNF608Q9ULD9 1512 aaPredicted RBP7.37□□□□□ -1.23
ZNF560-201ENST00000301480 POLA1P09884 1462 aaPredicted RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms