RNA–Protein interactions for RNA: ENST00000301480.4

ZNF560-201, Transcript of zinc finger protein 560, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF560, Length 2,654 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560-201ENST00000301480 AEBP2Q6ZN18 517 aaPredicted RBP11.33□□□□□ -0.59
ZNF560-201ENST00000301480 CHIC1Q5VXU3 224 aa10.82□□□□□ -0.68
ZNF560-201ENST00000301480 NISCHQ9Y2I1 1504 aa10.15□□□□□ -0.79
ZNF560-201ENST00000301480 SENP3Q9H4L4 574 aaPredicted RBP9.93□□□□□ -0.82
ZNF560-201ENST00000301480 POTEDQ86YR6 584 aa9.84□□□□□ -0.83
ZNF560-201ENST00000301480 PHF23Q9BUL5 403 aaPredicted RBP9.66□□□□□ -0.86
ZNF560-201ENST00000301480 CCDC180Q9P1Z9 1646 aa9.18□□□□□ -0.94
ZNF560-201ENST00000301480 FOXD1Q16676 465 aa9.17□□□□□ -0.94
ZNF560-201ENST00000301480 ABCC9O60706 1549 aa8.99□□□□□ -0.97
ZNF560-201ENST00000301480 SLC24A1O60721 1099 aa8.93□□□□□ -0.98
ZNF560-201ENST00000301480 MSH5O43196 834 aa8.88□□□□□ -0.99
ZNF560-201ENST00000301480 RB1CC1Q8TDY2 1594 aa8.72□□□□□ -1.01
ZNF560-201ENST00000301480 NACADO15069 1562 aa8.69□□□□□ -1.02
ZNF560-201ENST00000301480 MYO15BQ96JP2 1530 aa8.66□□□□□ -1.02
ZNF560-201ENST00000301480 PIAS4Q8N2W9 510 aaPredicted RBP8.52□□□□□ -1.05
ZNF560-201ENST00000301480 DCAF1Q9Y4B6 1507 aa8.52□□□□□ -1.05
ZNF560-201ENST00000301480 SHROOM4Q9ULL8 1493 aa8.51□□□□□ -1.05
ZNF560-201ENST00000301480 MYT1Q01538 1121 aa8.43□□□□□ -1.06
ZNF560-201ENST00000301480 ZCCHC6Q5VYS8 1495 aaKnown RBP8.42□□□□□ -1.06
ZNF560-201ENST00000301480 DNAJC5BQ9UF47 199 aa8.39□□□□□ -1.07
ZNF560-201ENST00000301480 PELP1Q8IZL8 1130 aaKnown RBP8.39□□□□□ -1.07
ZNF560-201ENST00000301480 DCAF8L2P0C7V8 631 aa8.37□□□□□ -1.07
ZNF560-201ENST00000301480 BICRAQ9NZM4 1560 aa8.37□□□□□ -1.07
ZNF560-201ENST00000301480 PRKCSHP14314 528 aaPredicted RBP8.37□□□□□ -1.07
ZNF560-201ENST00000301480 UNC13AQ9UPW8 1703 aa8.36□□□□□ -1.07
ZNF560-201ENST00000301480 PLPPR3Q6T4P5 718 aa8.33□□□□□ -1.08
ZNF560-201ENST00000301480 PABPN1Q86U42 306 aaKnown RBP eCLIP8.33□□□□□ -1.08
ZNF560-201ENST00000301480 TTBK1Q5TCY1 1321 aaPredicted RBP8.29□□□□□ -1.08
ZNF560-201ENST00000301480 DAXXQ9UER7 740 aaPredicted RBP8.26□□□□□ -1.09
ZNF560-201ENST00000301480 APLP2Q06481 763 aa8.23□□□□□ -1.09
ZNF560-201ENST00000301480 PPP6R1Q9UPN7 881 aa8.21□□□□□ -1.1
ZNF560-201ENST00000301480 ADRA2BP18089 450 aa8.2□□□□□ -1.1
ZNF560-201ENST00000301480 EIF4G1Q04637 1599 aaKnown RBP8.19□□□□□ -1.1
ZNF560-201ENST00000301480 SCRIBQ14160 1630 aa8.18□□□□□ -1.1
ZNF560-201ENST00000301480 CC2D2AQ9P2K1 1620 aa8.18□□□□□ -1.1
ZNF560-201ENST00000301480 CECR2Q9BXF3 1484 aa8.18□□□□□ -1.1
ZNF560-201ENST00000301480 ERICH6Q7L0X2 663 aa8.12□□□□□ -1.11
ZNF560-201ENST00000301480 NCAPD3P42695 1498 aa8.01□□□□□ -1.13
ZNF560-201ENST00000301480 SMARCA2P51531 1590 aa7.96□□□□□ -1.14
ZNF560-201ENST00000301480 HMGXB3Q12766 1538 aa7.95□□□□□ -1.14
ZNF560-201ENST00000301480 EHMT2Q96KQ7 1210 aa7.94□□□□□ -1.14
ZNF560-201ENST00000301480 CUX2O14529 1486 aa7.94□□□□□ -1.14
ZNF560-201ENST00000301480 DNAJC5Q9H3Z4 198 aa7.94□□□□□ -1.14
ZNF560-201ENST00000301480 ATAD2BQ9ULI0 1458 aa7.92□□□□□ -1.14
ZNF560-201ENST00000301480 PEG3Q9GZU2 1588 aa7.91□□□□□ -1.14
ZNF560-201ENST00000301480 BAZ1AQ9NRL2 1556 aaPredicted RBP7.91□□□□□ -1.14
ZNF560-201ENST00000301480 SMARCA4P51532 1647 aa7.89□□□□□ -1.15
ZNF560-201ENST00000301480 NCBP3Q53F19 620 aaKnown RBP7.88□□□□□ -1.15
ZNF560-201ENST00000301480 RTN4Q9NQC3 1192 aaKnown RBP7.88□□□□□ -1.15
ZNF560-201ENST00000301480 BAZ1BQ9UIG0 1483 aaKnown RBP7.84□□□□□ -1.15
ZNF560-201ENST00000301480 ERCC6Q03468 1493 aa7.83□□□□□ -1.16
ZNF560-201ENST00000301480 LAMC3Q9Y6N6 1575 aa7.82□□□□□ -1.16
ZNF560-201ENST00000301480 PDS5BQ9NTI5 1447 aa7.79□□□□□ -1.16
ZNF560-201ENST00000301480 DMRT2Q9Y5R5 561 aa7.78□□□□□ -1.16
ZNF560-201ENST00000301480 CACNB1Q02641 598 aaPredicted RBP7.78□□□□□ -1.16
ZNF560-201ENST00000301480 EIF5BO60841 1220 aaKnown RBP7.76□□□□□ -1.17
ZNF560-201ENST00000301480 SCAF1Q9H7N4 1312 aaKnown RBP7.76□□□□□ -1.17
ZNF560-201ENST00000301480 MROH2BQ7Z745 1585 aa7.74□□□□□ -1.17
ZNF560-201ENST00000301480 CADPSQ9ULU8 1353 aa7.73□□□□□ -1.17
ZNF560-201ENST00000301480 THOC2Q8NI27 1593 aaKnown RBP7.72□□□□□ -1.17
ZNF560-201ENST00000301480 NESP48681 1621 aa7.69□□□□□ -1.18
ZNF560-201ENST00000301480 BCL11AQ9H165 835 aa7.68□□□□□ -1.18
ZNF560-201ENST00000301480 MRC2Q9UBG0 1479 aa7.68□□□□□ -1.18
ZNF560-201ENST00000301480 WDR62O43379 1518 aa7.67□□□□□ -1.18
ZNF560-201ENST00000301480 TIMELESSQ9UNS1 1208 aa7.66□□□□□ -1.18
ZNF560-201ENST00000301480 PLEKHG5O94827 1062 aa7.65□□□□□ -1.18
ZNF560-201ENST00000301480 CFTRP13569 1480 aa7.65□□□□□ -1.19
ZNF560-201ENST00000301480 CEP164Q9UPV0 1460 aa7.63□□□□□ -1.19
ZNF560-201ENST00000301480 TOP2AP11388 1531 aaKnown RBP7.63□□□□□ -1.19
ZNF560-201ENST00000301480 ARXQ96QS3 562 aa7.63□□□□□ -1.19
ZNF560-201ENST00000301480 KIF21AQ7Z4S6 1674 aa7.62□□□□□ -1.19
ZNF560-201ENST00000301480 RSF1Q96T23 1441 aaPredicted RBP7.62□□□□□ -1.19
ZNF560-201ENST00000301480 MAPK8IP2Q13387 824 aaPredicted RBP7.61□□□□□ -1.19
ZNF560-201ENST00000301480 WIZO95785 1651 aa7.6□□□□□ -1.19
ZNF560-201ENST00000301480 FANCD2Q9BXW9 1451 aa7.6□□□□□ -1.19
ZNF560-201ENST00000301480 KLHL34Q8N239 644 aa7.6□□□□□ -1.19
ZNF560-201ENST00000301480 ABCC8Q09428 1581 aa7.58□□□□□ -1.2
ZNF560-201ENST00000301480 FAM9AQ8IZU1 332 aaPredicted RBP7.56□□□□□ -1.2
ZNF560-201ENST00000301480 PRDM2Q13029 1718 aa7.54□□□□□ -1.2
ZNF560-201ENST00000301480 IFT140Q96RY7 1462 aa7.52□□□□□ -1.21
ZNF560-201ENST00000301480 RANGAP1P46060 587 aaPredicted RBP7.51□□□□□ -1.21
ZNF560-201ENST00000301480 URB2Q14146 1524 aaKnown RBP7.51□□□□□ -1.21
ZNF560-201ENST00000301480 OSCARQ8IYS5 282 aa7.51□□□□□ -1.21
ZNF560-201ENST00000301480 TULP1O00294 542 aaPredicted RBP7.5□□□□□ -1.21
ZNF560-201ENST00000301480 CCDC88BA6NC98 1476 aa7.49□□□□□ -1.21
ZNF560-201ENST00000301480 WDR97A6NE52 1622 aa7.48□□□□□ -1.21
ZNF560-201ENST00000301480 AMER1Q5JTC6 1135 aaPredicted RBP7.48□□□□□ -1.21
ZNF560-201ENST00000301480 DNMBPQ6XZF7 1577 aa7.46□□□□□ -1.21
ZNF560-201ENST00000301480 TOPBP1Q92547 1522 aa7.45□□□□□ -1.22
ZNF560-201ENST00000301480 RNF39Q9H2S5 420 aa7.45□□□□□ -1.22
ZNF560-201ENST00000301480 DCAF8L1A6NGE4 600 aa7.44□□□□□ -1.22
ZNF560-201ENST00000301480 KCNA4P22459 653 aa7.41□□□□□ -1.22
ZNF560-201ENST00000301480 C1QBPQ07021 282 aaKnown RBP7.41□□□□□ -1.22
ZNF560-201ENST00000301480 POTEHQ6S545 545 aa7.4□□□□□ -1.22
ZNF560-201ENST00000301480 PODXL2Q9NZ53 605 aa7.39□□□□□ -1.23
ZNF560-201ENST00000301480 TARBP1Q13395 1621 aaKnown RBP7.39□□□□□ -1.23
ZNF560-201ENST00000301480 EIF4G3O43432 1585 aaKnown RBP7.37□□□□□ -1.23
ZNF560-201ENST00000301480 HOMEZQ8IX15 550 aa7.37□□□□□ -1.23
ZNF560-201ENST00000301480 ZNF608Q9ULD9 1512 aaPredicted RBP7.37□□□□□ -1.23
ZNF560-201ENST00000301480 POLA1P09884 1462 aaPredicted RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms