RNA–Protein interactions for RNA: ENST00000523054.5

CDKL3-209, Transcript of cyclin dependent kinase like 3, humanhuman

TSL 2 BASIC

Gene CDKL3, Length 1,775 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-209ENST00000523054 AEBP2Q6ZN18 517 aaPredicted RBP18.12■□□□□ 0.49
CDKL3-209ENST00000523054 CHIC1Q5VXU3 224 aa16.94■□□□□ 0.3
CDKL3-209ENST00000523054 SENP3Q9H4L4 574 aaPredicted RBP15.54■□□□□ 0.08
CDKL3-209ENST00000523054 PHF23Q9BUL5 403 aaPredicted RBP15.26■□□□□ 0.03
CDKL3-209ENST00000523054 FOXD1Q16676 465 aa14.52□□□□□ -0.09
CDKL3-209ENST00000523054 POTEDQ86YR6 584 aa14.15□□□□□ -0.14
CDKL3-209ENST00000523054 MSH5O43196 834 aa13.78□□□□□ -0.2
CDKL3-209ENST00000523054 PIAS4Q8N2W9 510 aaPredicted RBP13.45□□□□□ -0.26
CDKL3-209ENST00000523054 PLPPR3Q6T4P5 718 aa13.24□□□□□ -0.29
CDKL3-209ENST00000523054 PPP6R1Q9UPN7 881 aa13.22□□□□□ -0.29
CDKL3-209ENST00000523054 ADRA2BP18089 450 aa13.15□□□□□ -0.3
CDKL3-209ENST00000523054 DMRT2Q9Y5R5 561 aa12.26□□□□□ -0.45
CDKL3-209ENST00000523054 MAPK8IP2Q13387 824 aaPredicted RBP12.2□□□□□ -0.46
CDKL3-209ENST00000523054 SCAF1Q9H7N4 1312 aaKnown RBP12.08□□□□□ -0.48
CDKL3-209ENST00000523054 CACNB1Q02641 598 aaPredicted RBP12.05□□□□□ -0.48
CDKL3-209ENST00000523054 DNAJC5BQ9UF47 199 aa11.76□□□□□ -0.53
CDKL3-209ENST00000523054 RNF39Q9H2S5 420 aa11.72□□□□□ -0.53
CDKL3-209ENST00000523054 DCAF8L1A6NGE4 600 aa11.71□□□□□ -0.54
CDKL3-209ENST00000523054 DNAJC5Q9H3Z4 198 aa11.68□□□□□ -0.54
CDKL3-209ENST00000523054 HOXD11P31277 338 aaPredicted RBP11.66□□□□□ -0.54
CDKL3-209ENST00000523054 ABCC9O60706 1549 aa11.55□□□□□ -0.56
CDKL3-209ENST00000523054 PPP4R3CPQ6ZMV5 832 aa11.54□□□□□ -0.56
CDKL3-209ENST00000523054 C1QBPQ07021 282 aaKnown RBP11.52□□□□□ -0.57
CDKL3-209ENST00000523054 RNF216Q9NWF9 866 aaPredicted RBP11.45□□□□□ -0.58
CDKL3-209ENST00000523054 CNKSR2Q8WXI2 1034 aa11.44□□□□□ -0.58
CDKL3-209ENST00000523054 NISCHQ9Y2I1 1504 aa11.18□□□□□ -0.62
CDKL3-209ENST00000523054 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.05□□□□□ -0.64
CDKL3-209ENST00000523054 POTEHQ6S545 545 aa11□□□□□ -0.65
CDKL3-209ENST00000523054 NCBP3Q53F19 620 aaKnown RBP10.98□□□□□ -0.65
CDKL3-209ENST00000523054 DSG3P32926 999 aa10.81□□□□□ -0.68
CDKL3-209ENST00000523054 NPM3O75607 178 aaKnown RBP10.8□□□□□ -0.68
CDKL3-209ENST00000523054 U3KPZ7 1027 aaPredicted RBP10.8□□□□□ -0.68
CDKL3-209ENST00000523054 CAPN15O75808 1086 aa10.75□□□□□ -0.69
CDKL3-209ENST00000523054 SPINK5Q9NQ38 1064 aaPredicted RBP10.75□□□□□ -0.69
CDKL3-209ENST00000523054 TRIM41Q8WV44 630 aa10.71□□□□□ -0.69
CDKL3-209ENST00000523054 RB1CC1Q8TDY2 1594 aa10.56□□□□□ -0.72
CDKL3-209ENST00000523054 CECR2Q9BXF3 1484 aa10.54□□□□□ -0.72
CDKL3-209ENST00000523054 CCDC180Q9P1Z9 1646 aa10.54□□□□□ -0.72
CDKL3-209ENST00000523054 PABPN1Q86U42 306 aaKnown RBP eCLIP10.53□□□□□ -0.72
CDKL3-209ENST00000523054 APLP2Q06481 763 aa10.49□□□□□ -0.73
CDKL3-209ENST00000523054 ZNF219Q9P2Y4 722 aaPredicted RBP10.48□□□□□ -0.73
CDKL3-209ENST00000523054 CUX2O14529 1486 aa10.47□□□□□ -0.73
CDKL3-209ENST00000523054 TRHP20396 242 aaPredicted RBP10.46□□□□□ -0.74
CDKL3-209ENST00000523054 ABCB7O75027 752 aa10.45□□□□□ -0.74
CDKL3-209ENST00000523054 SLC4A2P04920 1241 aa10.43□□□□□ -0.74
CDKL3-209ENST00000523054 KCNA4P22459 653 aa10.42□□□□□ -0.74
CDKL3-209ENST00000523054 CC2D2AQ9P2K1 1620 aa10.4□□□□□ -0.74
CDKL3-209ENST00000523054 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.36□□□□□ -0.75
CDKL3-209ENST00000523054 HNRNPUL2Q1KMD3 747 aaKnown RBP10.36□□□□□ -0.75
CDKL3-209ENST00000523054 RBM42Q9BTD8 480 aaKnown RBP10.35□□□□□ -0.75
CDKL3-209ENST00000523054 UNC13AQ9UPW8 1703 aa10.3□□□□□ -0.76
CDKL3-209ENST00000523054 SAMD1Q6SPF0 538 aaPredicted RBP10.27□□□□□ -0.77
CDKL3-209ENST00000523054 CHRDL2Q6WN34 429 aa10.26□□□□□ -0.77
CDKL3-209ENST00000523054 BICRAQ9NZM4 1560 aa10.23□□□□□ -0.77
CDKL3-209ENST00000523054 ILDR1Q86SU0 546 aaPredicted RBP10.21□□□□□ -0.77
CDKL3-209ENST00000523054 NACADO15069 1562 aa10.21□□□□□ -0.78
CDKL3-209ENST00000523054 SP7Q8TDD2 431 aaPredicted RBP10.12□□□□□ -0.79
CDKL3-209ENST00000523054 ERCC6Q03468 1493 aa10.1□□□□□ -0.79
CDKL3-209ENST00000523054 EIF4G1Q04637 1599 aaKnown RBP10.09□□□□□ -0.79
CDKL3-209ENST00000523054 POLA2Q14181 598 aa10.09□□□□□ -0.79
CDKL3-209ENST00000523054 SHROOM4Q9ULL8 1493 aa10.06□□□□□ -0.8
CDKL3-209ENST00000523054 MYCNP04198 464 aaPredicted RBP10.02□□□□□ -0.81
CDKL3-209ENST00000523054 AKT1S1Q96B36 256 aa10.02□□□□□ -0.81
CDKL3-209ENST00000523054 PIP4P2Q8N4L2 257 aa9.93□□□□□ -0.82
CDKL3-209ENST00000523054 ZBTB12Q9Y330 459 aaPredicted RBP9.91□□□□□ -0.82
CDKL3-209ENST00000523054 REM2Q8IYK8 340 aaPredicted RBP9.9□□□□□ -0.82
CDKL3-209ENST00000523054 SLC4A1APQ9BWU0 796 aaKnown RBP9.9□□□□□ -0.82
CDKL3-209ENST00000523054 DCAF8L2P0C7V8 631 aa9.85□□□□□ -0.83
CDKL3-209ENST00000523054 HAX1O00165 279 aa9.83□□□□□ -0.84
CDKL3-209ENST00000523054 FXR2P51116 673 aaKnown RBP eCLIP9.83□□□□□ -0.84
CDKL3-209ENST00000523054 EHMT2Q96KQ7 1210 aa9.83□□□□□ -0.84
CDKL3-209ENST00000523054 PITPNM1O00562 1244 aa9.8□□□□□ -0.84
CDKL3-209ENST00000523054 OSCARQ8IYS5 282 aa9.8□□□□□ -0.84
CDKL3-209ENST00000523054 RIMBP3CA6NJZ7 1639 aa9.78□□□□□ -0.84
CDKL3-209ENST00000523054 RIMBP3BA6NNM3 1639 aa9.78□□□□□ -0.84
CDKL3-209ENST00000523054 RIMBP3Q9UFD9 1639 aa9.78□□□□□ -0.84
CDKL3-209ENST00000523054 ATF5Q9Y2D1 282 aaPredicted RBP9.78□□□□□ -0.84
CDKL3-209ENST00000523054 THOC2Q8NI27 1593 aaKnown RBP9.76□□□□□ -0.85
CDKL3-209ENST00000523054 BAZ1AQ9NRL2 1556 aaPredicted RBP9.75□□□□□ -0.85
CDKL3-209ENST00000523054 EVX2Q03828 476 aa9.69□□□□□ -0.86
CDKL3-209ENST00000523054 MYO15BQ96JP2 1530 aa9.69□□□□□ -0.86
CDKL3-209ENST00000523054 FOXD4L1Q9NU39 408 aa9.68□□□□□ -0.86
CDKL3-209ENST00000523054 PLSCR2Q9NRY7 297 aa9.65□□□□□ -0.87
CDKL3-209ENST00000523054 LMTK3Q96Q04 1460 aa9.64□□□□□ -0.87
CDKL3-209ENST00000523054 SOCS7O14512 581 aa9.63□□□□□ -0.87
CDKL3-209ENST00000523054 ARHGEF11O15085 1522 aa9.62□□□□□ -0.87
CDKL3-209ENST00000523054 ZBTB22O15209 634 aa9.58□□□□□ -0.88
CDKL3-209ENST00000523054 CYB5RLQ6IPT4 315 aa9.58□□□□□ -0.88
CDKL3-209ENST00000523054 NESP48681 1621 aa9.58□□□□□ -0.88
CDKL3-209ENST00000523054 SMARCA2P51531 1590 aa9.58□□□□□ -0.88
CDKL3-209ENST00000523054 SPDYE2BA6NHP3 402 aa9.55□□□□□ -0.88
CDKL3-209ENST00000523054 SPDYE6P0CI01 402 aa9.55□□□□□ -0.88
CDKL3-209ENST00000523054 SPDYE2Q495Y8 402 aa9.55□□□□□ -0.88
CDKL3-209ENST00000523054 SCRIBQ14160 1630 aa9.55□□□□□ -0.88
CDKL3-209ENST00000523054 PRKAR2AP13861 404 aaKnown RBP9.53□□□□□ -0.88
CDKL3-209ENST00000523054 C19orf67A6NJJ6 358 aa9.52□□□□□ -0.88
CDKL3-209ENST00000523054 FBXO41Q8TF61 875 aa9.52□□□□□ -0.88
CDKL3-209ENST00000523054 SPDYE1Q8NFV5 336 aaPredicted RBP9.49□□□□□ -0.89
CDKL3-209ENST00000523054 KIF21AQ7Z4S6 1674 aa9.48□□□□□ -0.89
CDKL3-209ENST00000523054 LHX8Q68G74 356 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms