RNA–Protein interactions for RNA: ENST00000433211.6

CTNNA3-203, Transcript of catenin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNA3, Length 10,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3-203ENST00000433211 NISCHQ9Y2I1 1504 aa8.3□□□□□ -1.08
CTNNA3-203ENST00000433211 PELP1Q8IZL8 1130 aaKnown RBP7.4□□□□□ -1.23
CTNNA3-203ENST00000433211 CCDC180Q9P1Z9 1646 aa7.34□□□□□ -1.23
CTNNA3-203ENST00000433211 ZEB1P37275 1124 aaPredicted RBP7.29□□□□□ -1.24
CTNNA3-203ENST00000433211 MYT1Q01538 1121 aa7.26□□□□□ -1.25
CTNNA3-203ENST00000433211 FAM9AQ8IZU1 332 aaPredicted RBP7.16□□□□□ -1.26
CTNNA3-203ENST00000433211 DCAF8L2P0C7V8 631 aa7.15□□□□□ -1.26
CTNNA3-203ENST00000433211 APLP2Q06481 763 aa7.09□□□□□ -1.27
CTNNA3-203ENST00000433211 DCAF1Q9Y4B6 1507 aa7.06□□□□□ -1.28
CTNNA3-203ENST00000433211 SUPT5HO00267 1087 aaKnown RBP7.05□□□□□ -1.28
CTNNA3-203ENST00000433211 CENPBP07199 599 aaPredicted RBP7.01□□□□□ -1.29
CTNNA3-203ENST00000433211 ZCCHC6Q5VYS8 1495 aaKnown RBP7□□□□□ -1.29
CTNNA3-203ENST00000433211 CCER1Q8TC90 406 aaPredicted RBP6.97□□□□□ -1.29
CTNNA3-203ENST00000433211 MYO15BQ96JP2 1530 aa6.96□□□□□ -1.29
CTNNA3-203ENST00000433211 ACIN1Q9UKV3 1341 aaKnown RBP6.91□□□□□ -1.3
CTNNA3-203ENST00000433211 CLSPNQ9HAW4 1339 aa6.91□□□□□ -1.3
CTNNA3-203ENST00000433211 SHROOM4Q9ULL8 1493 aa6.9□□□□□ -1.3
CTNNA3-203ENST00000433211 TRIM41Q8WV44 630 aa6.86□□□□□ -1.31
CTNNA3-203ENST00000433211 NACADO15069 1562 aa6.86□□□□□ -1.31
CTNNA3-203ENST00000433211 EEA1Q15075 1411 aa6.84□□□□□ -1.31
CTNNA3-203ENST00000433211 TRIM26Q12899 539 aaPredicted RBP6.82□□□□□ -1.32
CTNNA3-203ENST00000433211 RB1CC1Q8TDY2 1594 aa6.79□□□□□ -1.32
CTNNA3-203ENST00000433211 NEFLP07196 543 aa6.75□□□□□ -1.33
CTNNA3-203ENST00000433211 YTHDC1Q96MU7 727 aaKnown RBP6.74□□□□□ -1.33
CTNNA3-203ENST00000433211 HRCP23327 699 aa6.73□□□□□ -1.33
CTNNA3-203ENST00000433211 TTBK1Q5TCY1 1321 aaPredicted RBP6.7□□□□□ -1.34
CTNNA3-203ENST00000433211 CHIC1Q5VXU3 224 aa6.69□□□□□ -1.34
CTNNA3-203ENST00000433211 ABCC9O60706 1549 aa6.69□□□□□ -1.34
CTNNA3-203ENST00000433211 PCGF6Q9BYE7 350 aa6.66□□□□□ -1.34
CTNNA3-203ENST00000433211 BAZ1AQ9NRL2 1556 aaPredicted RBP6.66□□□□□ -1.34
CTNNA3-203ENST00000433211 UBTFP17480 764 aaKnown RBP6.64□□□□□ -1.35
CTNNA3-203ENST00000433211 MYT1LQ9UL68 1186 aa6.63□□□□□ -1.35
CTNNA3-203ENST00000433211 ERICH6Q7L0X2 663 aa6.59□□□□□ -1.35
CTNNA3-203ENST00000433211 SCRIBQ14160 1630 aa6.55□□□□□ -1.36
CTNNA3-203ENST00000433211 SMARCA2P51531 1590 aa6.55□□□□□ -1.36
CTNNA3-203ENST00000433211 GOLGA3Q08378 1498 aa6.53□□□□□ -1.36
CTNNA3-203ENST00000433211 CEP164Q9UPV0 1460 aa6.52□□□□□ -1.37
CTNNA3-203ENST00000433211 CDK11AQ9UQ88 783 aaPredicted RBP6.48□□□□□ -1.37
CTNNA3-203ENST00000433211 RSF1Q96T23 1441 aaPredicted RBP6.47□□□□□ -1.37
CTNNA3-203ENST00000433211 BAZ1BQ9UIG0 1483 aaKnown RBP6.46□□□□□ -1.37
CTNNA3-203ENST00000433211 TOP2AP11388 1531 aaKnown RBP6.46□□□□□ -1.38
CTNNA3-203ENST00000433211 TNIKQ9UKE5 1360 aa6.46□□□□□ -1.38
CTNNA3-203ENST00000433211 TIMELESSQ9UNS1 1208 aa6.45□□□□□ -1.38
CTNNA3-203ENST00000433211 CSRNP3Q8WYN3 585 aa6.45□□□□□ -1.38
CTNNA3-203ENST00000433211 DAXXQ9UER7 740 aaPredicted RBP6.45□□□□□ -1.38
CTNNA3-203ENST00000433211 FHAD1B1AJZ9 1412 aa6.45□□□□□ -1.38
CTNNA3-203ENST00000433211 EIF5BO60841 1220 aaKnown RBP6.44□□□□□ -1.38
CTNNA3-203ENST00000433211 CLIP1P30622 1438 aa6.43□□□□□ -1.38
CTNNA3-203ENST00000433211 KIF27Q86VH2 1401 aa6.43□□□□□ -1.38
CTNNA3-203ENST00000433211 ARID4BQ4LE39 1312 aaPredicted RBP6.42□□□□□ -1.38
CTNNA3-203ENST00000433211 WRNQ14191 1432 aaPredicted RBP eCLIP6.41□□□□□ -1.381e-6■■■■■ 58.5
CTNNA3-203ENST00000433211 CEP162Q5TB80 1403 aa6.4□□□□□ -1.38
CTNNA3-203ENST00000433211 SLC24A1O60721 1099 aa6.39□□□□□ -1.39
CTNNA3-203ENST00000433211 DIEXFQ68CQ4 756 aaKnown RBP6.39□□□□□ -1.39
CTNNA3-203ENST00000433211 RTL5Q5HYW3 569 aaPredicted RBP6.39□□□□□ -1.39
CTNNA3-203ENST00000433211 NEFMP07197 916 aa6.39□□□□□ -1.39
CTNNA3-203ENST00000433211 ABCC8Q09428 1581 aa6.38□□□□□ -1.39
CTNNA3-203ENST00000433211 ZNF316A6NFI3 1004 aaPredicted RBP6.37□□□□□ -1.39
CTNNA3-203ENST00000433211 ANP32CO43423 234 aa6.35□□□□□ -1.39
CTNNA3-203ENST00000433211 EHMT2Q96KQ7 1210 aa6.35□□□□□ -1.39
CTNNA3-203ENST00000433211 SMARCA4P51532 1647 aa6.34□□□□□ -1.4
CTNNA3-203ENST00000433211 VPS8Q8N3P4 1428 aa6.33□□□□□ -1.4
CTNNA3-203ENST00000433211 ERICH6BQ5W0A0 696 aa6.32□□□□□ -1.4
CTNNA3-203ENST00000433211 TONSLQ96HA7 1378 aa6.32□□□□□ -1.4
CTNNA3-203ENST00000433211 FMN1Q68DA7 1419 aa6.31□□□□□ -1.4
CTNNA3-203ENST00000433211 ERICH3Q5RHP9 1530 aa6.31□□□□□ -1.4
CTNNA3-203ENST00000433211 ANP32EQ9BTT0 268 aa6.3□□□□□ -1.4
CTNNA3-203ENST00000433211 HMGXB3Q12766 1538 aa6.29□□□□□ -1.4
CTNNA3-203ENST00000433211 KIF21BO75037 1637 aa6.28□□□□□ -1.4
CTNNA3-203ENST00000433211 NEUROD1Q13562 356 aa6.27□□□□□ -1.41
CTNNA3-203ENST00000433211 CUX1P39880 1505 aa6.27□□□□□ -1.41
CTNNA3-203ENST00000433211 CDCA8Q53HL2 280 aa6.26□□□□□ -1.41
CTNNA3-203ENST00000433211 ATP1B4Q9UN42 357 aaPredicted RBP6.25□□□□□ -1.41
CTNNA3-203ENST00000433211 EFCAB5A4FU69 1503 aa6.25□□□□□ -1.41
CTNNA3-203ENST00000433211 MTUS2Q5JR59 1369 aa6.25□□□□□ -1.41
CTNNA3-203ENST00000433211 ANP32AP39687 249 aaKnown RBP6.24□□□□□ -1.41
CTNNA3-203ENST00000433211 CHMP4BQ9H444 224 aaKnown RBP6.24□□□□□ -1.41
CTNNA3-203ENST00000433211 PDS5BQ9NTI5 1447 aa6.23□□□□□ -1.41
CTNNA3-203ENST00000433211 ROCK2O75116 1388 aaKnown RBP6.23□□□□□ -1.41
CTNNA3-203ENST00000433211 ARHGAP35Q9NRY4 1499 aa6.23□□□□□ -1.41
CTNNA3-203ENST00000433211 SCAF1Q9H7N4 1312 aaKnown RBP6.23□□□□□ -1.41
CTNNA3-203ENST00000433211 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.22□□□□□ -1.41
CTNNA3-203ENST00000433211 HNRNPUL2Q1KMD3 747 aaKnown RBP6.21□□□□□ -1.41
CTNNA3-203ENST00000433211 CCNB3Q8WWL7 1395 aa6.21□□□□□ -1.42
CTNNA3-203ENST00000433211 ZBTB47Q9UFB7 747 aaPredicted RBP6.21□□□□□ -1.42
CTNNA3-203ENST00000433211 CFAP44Q96MT7 982 aa6.21□□□□□ -1.42
CTNNA3-203ENST00000433211 CCDC18Q5T9S5 1454 aa6.2□□□□□ -1.42
CTNNA3-203ENST00000433211 FAM50AQ14320 339 aaKnown RBP6.2□□□□□ -1.42
CTNNA3-203ENST00000433211 PEG3Q9GZU2 1588 aa6.2□□□□□ -1.42
CTNNA3-203ENST00000433211 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.2□□□□□ -1.42
CTNNA3-203ENST00000433211 UPF2Q9HAU5 1272 aaKnown RBP6.19□□□□□ -1.42
CTNNA3-203ENST00000433211 PHLDB1Q86UU1 1377 aa6.19□□□□□ -1.42
CTNNA3-203ENST00000433211 CCER2I3L3R5 266 aa6.19□□□□□ -1.42
CTNNA3-203ENST00000433211 SCAPERQ9BY12 1400 aa6.19□□□□□ -1.42
CTNNA3-203ENST00000433211 LOC105371045A0A1W2PR82 267 aa6.18□□□□□ -1.42
CTNNA3-203ENST00000433211 MAP3K1Q13233 1512 aa6.18□□□□□ -1.42
CTNNA3-203ENST00000433211 MROH2BQ7Z745 1585 aa6.18□□□□□ -1.42
CTNNA3-203ENST00000433211 CCDC88BA6NC98 1476 aa6.18□□□□□ -1.42
CTNNA3-203ENST00000433211 CARMIL2Q6F5E8 1435 aa6.18□□□□□ -1.42
CTNNA3-203ENST00000433211 RAPGEF2Q9Y4G8 1499 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms