RNA–Protein interactions for RNA: ENST00000505454.1

AC116563.1-201, humanhuman

TSL 3 BASIC

Gene AC116563.1, Length 396 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC116563.1-201ENST00000505454 AEBP2Q6ZN18 517 aaPredicted RBP17.27■□□□□ 0.36
AC116563.1-201ENST00000505454 CHIC1Q5VXU3 224 aa16.3■□□□□ 0.2
AC116563.1-201ENST00000505454 SENP3Q9H4L4 574 aaPredicted RBP14.73□□□□□ -0.05
AC116563.1-201ENST00000505454 PHF23Q9BUL5 403 aaPredicted RBP14.57□□□□□ -0.08
AC116563.1-201ENST00000505454 FOXD1Q16676 465 aa13.76□□□□□ -0.21
AC116563.1-201ENST00000505454 PLPPR3Q6T4P5 718 aa12.99□□□□□ -0.33
AC116563.1-201ENST00000505454 MSH5O43196 834 aa12.88□□□□□ -0.35
AC116563.1-201ENST00000505454 PIAS4Q8N2W9 510 aaPredicted RBP12.84□□□□□ -0.35
AC116563.1-201ENST00000505454 PPP6R1Q9UPN7 881 aa12.83□□□□□ -0.36
AC116563.1-201ENST00000505454 ADRA2BP18089 450 aa12.8□□□□□ -0.36
AC116563.1-201ENST00000505454 POTEDQ86YR6 584 aa12.75□□□□□ -0.37
AC116563.1-201ENST00000505454 MAPK8IP2Q13387 824 aaPredicted RBP11.8□□□□□ -0.52
AC116563.1-201ENST00000505454 SCAF1Q9H7N4 1312 aaKnown RBP11.67□□□□□ -0.54
AC116563.1-201ENST00000505454 DMRT2Q9Y5R5 561 aa11.66□□□□□ -0.54
AC116563.1-201ENST00000505454 PPP4R3CPQ6ZMV5 832 aa11.4□□□□□ -0.58
AC116563.1-201ENST00000505454 DCAF8L1A6NGE4 600 aa11.28□□□□□ -0.6
AC116563.1-201ENST00000505454 HOXD11P31277 338 aaPredicted RBP11.18□□□□□ -0.62
AC116563.1-201ENST00000505454 CNKSR2Q8WXI2 1034 aa11.18□□□□□ -0.62
AC116563.1-201ENST00000505454 CACNB1Q02641 598 aaPredicted RBP11.17□□□□□ -0.62
AC116563.1-201ENST00000505454 RNF216Q9NWF9 866 aaPredicted RBP11.09□□□□□ -0.63
AC116563.1-201ENST00000505454 RNF39Q9H2S5 420 aa10.98□□□□□ -0.65
AC116563.1-201ENST00000505454 NCBP3Q53F19 620 aaKnown RBP10.93□□□□□ -0.66
AC116563.1-201ENST00000505454 C1QBPQ07021 282 aaKnown RBP10.83□□□□□ -0.68
AC116563.1-201ENST00000505454 NPM3O75607 178 aaKnown RBP10.77□□□□□ -0.69
AC116563.1-201ENST00000505454 DNAJC5BQ9UF47 199 aa10.77□□□□□ -0.69
AC116563.1-201ENST00000505454 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.73□□□□□ -0.69
AC116563.1-201ENST00000505454 KCNA4P22459 653 aa10.51□□□□□ -0.73
AC116563.1-201ENST00000505454 U3KPZ7 1027 aaPredicted RBP10.45□□□□□ -0.74
AC116563.1-201ENST00000505454 CAPN15O75808 1086 aa10.36□□□□□ -0.75
AC116563.1-201ENST00000505454 SPINK5Q9NQ38 1064 aaPredicted RBP10.36□□□□□ -0.75
AC116563.1-201ENST00000505454 SLC4A2P04920 1241 aa10.31□□□□□ -0.76
AC116563.1-201ENST00000505454 DSG3P32926 999 aa10.28□□□□□ -0.76
AC116563.1-201ENST00000505454 TRHP20396 242 aaPredicted RBP10.19□□□□□ -0.78
AC116563.1-201ENST00000505454 APLP2Q06481 763 aa10.13□□□□□ -0.79
AC116563.1-201ENST00000505454 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.11□□□□□ -0.79
AC116563.1-201ENST00000505454 ABCB7O75027 752 aa10.11□□□□□ -0.79
AC116563.1-201ENST00000505454 HNRNPUL2Q1KMD3 747 aaKnown RBP10.11□□□□□ -0.79
AC116563.1-201ENST00000505454 ZNF219Q9P2Y4 722 aaPredicted RBP10.1□□□□□ -0.79
AC116563.1-201ENST00000505454 SAMD1Q6SPF0 538 aaPredicted RBP10.06□□□□□ -0.8
AC116563.1-201ENST00000505454 POTEHQ6S545 545 aa9.98□□□□□ -0.81
AC116563.1-201ENST00000505454 MYCNP04198 464 aaPredicted RBP9.94□□□□□ -0.82
AC116563.1-201ENST00000505454 SLC4A1APQ9BWU0 796 aaKnown RBP9.9□□□□□ -0.82
AC116563.1-201ENST00000505454 POLA2Q14181 598 aa9.87□□□□□ -0.83
AC116563.1-201ENST00000505454 FOXD4L1Q9NU39 408 aa9.81□□□□□ -0.84
AC116563.1-201ENST00000505454 RBM42Q9BTD8 480 aaKnown RBP9.79□□□□□ -0.84
AC116563.1-201ENST00000505454 ATF5Q9Y2D1 282 aaPredicted RBP9.76□□□□□ -0.85
AC116563.1-201ENST00000505454 ZBTB22O15209 634 aa9.64□□□□□ -0.87
AC116563.1-201ENST00000505454 CHRDL2Q6WN34 429 aa9.63□□□□□ -0.87
AC116563.1-201ENST00000505454 ZBTB12Q9Y330 459 aaPredicted RBP9.6□□□□□ -0.87
AC116563.1-201ENST00000505454 AKT1S1Q96B36 256 aa9.56□□□□□ -0.88
AC116563.1-201ENST00000505454 OSCARQ8IYS5 282 aa9.54□□□□□ -0.88
AC116563.1-201ENST00000505454 ATXN8OSP0DMR3 200 aa9.49□□□□□ -0.89
AC116563.1-201ENST00000505454 REM2Q8IYK8 340 aaPredicted RBP9.49□□□□□ -0.89
AC116563.1-201ENST00000505454 PIP4P2Q8N4L2 257 aa9.39□□□□□ -0.91
AC116563.1-201ENST00000505454 FBLN2P98095 1184 aa9.38□□□□□ -0.91
AC116563.1-201ENST00000505454 PITPNM1O00562 1244 aa9.37□□□□□ -0.91
AC116563.1-201ENST00000505454 SPDYE2BA6NHP3 402 aa9.32□□□□□ -0.92
AC116563.1-201ENST00000505454 SPDYE6P0CI01 402 aa9.32□□□□□ -0.92
AC116563.1-201ENST00000505454 SPDYE2Q495Y8 402 aa9.32□□□□□ -0.92
AC116563.1-201ENST00000505454 FXR2P51116 673 aaKnown RBP eCLIP9.3□□□□□ -0.92
AC116563.1-201ENST00000505454 SP7Q8TDD2 431 aaPredicted RBP9.3□□□□□ -0.92
AC116563.1-201ENST00000505454 HAX1O00165 279 aa9.29□□□□□ -0.92
AC116563.1-201ENST00000505454 MKRN4PQ13434 485 aaPredicted RBP9.28□□□□□ -0.92
AC116563.1-201ENST00000505454 ZNF692Q9BU19 519 aaPredicted RBP9.24□□□□□ -0.93
AC116563.1-201ENST00000505454 CLEC11AQ9Y240 323 aa9.24□□□□□ -0.93
AC116563.1-201ENST00000505454 SPDYE1Q8NFV5 336 aaPredicted RBP9.19□□□□□ -0.94
AC116563.1-201ENST00000505454 PRKAR2AP13861 404 aaKnown RBP9.16□□□□□ -0.94
AC116563.1-201ENST00000505454 SSUH2Q9Y2M2 353 aa9.16□□□□□ -0.94
AC116563.1-201ENST00000505454 EVX2Q03828 476 aa9.15□□□□□ -0.94
AC116563.1-201ENST00000505454 CSRNP3Q8WYN3 585 aa9.14□□□□□ -0.95
AC116563.1-201ENST00000505454 PABPN1Q86U42 306 aaKnown RBP eCLIP9.1□□□□□ -0.95
AC116563.1-201ENST00000505454 CHADLQ6NUI6 762 aa9.06□□□□□ -0.96
AC116563.1-201ENST00000505454 PRR29P0C7W0 189 aa9.05□□□□□ -0.96
AC116563.1-201ENST00000505454 C19orf67A6NJJ6 358 aa9.01□□□□□ -0.97
AC116563.1-201ENST00000505454 EHMT2Q96KQ7 1210 aa9.01□□□□□ -0.97
AC116563.1-201ENST00000505454 GABBR2O75899 941 aa8.93□□□□□ -0.98
AC116563.1-201ENST00000505454 FARP1Q9Y4F1 1045 aaPredicted RBP8.89□□□□□ -0.99
AC116563.1-201ENST00000505454 CD44P16070 742 aaKnown RBP8.85□□□□□ -0.99
AC116563.1-201ENST00000505454 SPDYE4A6NLX3 237 aa8.82□□□□□ -1
AC116563.1-201ENST00000505454 STAG3Q9UJ98 1225 aa8.8□□□□□ -1
AC116563.1-201ENST00000505454 CREBZFQ9NS37 354 aa8.78□□□□□ -1
AC116563.1-201ENST00000505454 LHX8Q68G74 356 aa8.75□□□□□ -1.01
AC116563.1-201ENST00000505454 ZRANB1Q9UGI0 708 aa8.73□□□□□ -1.01
AC116563.1-201ENST00000505454 POTEIP0CG38 1075 aa8.72□□□□□ -1.01
AC116563.1-201ENST00000505454 CLCN6P51797 869 aa8.7□□□□□ -1.02
AC116563.1-201ENST00000505454 DCBLD2Q96PD2 775 aa8.69□□□□□ -1.02
AC116563.1-201ENST00000505454 ZNF579Q8NAF0 562 aaKnown RBP8.67□□□□□ -1.02
AC116563.1-201ENST00000505454 PAK3O75914 559 aaPredicted RBP8.63□□□□□ -1.03
AC116563.1-201ENST00000505454 NPM1P06748 294 aaKnown RBP eCLIP8.63□□□□□ -1.03
AC116563.1-201ENST00000505454 GALR2O43603 387 aaPredicted RBP8.62□□□□□ -1.03
AC116563.1-201ENST00000505454 PHF12Q96QT6 1004 aa8.6□□□□□ -1.03
AC116563.1-201ENST00000505454 MNX1P50219 401 aaPredicted RBP8.59□□□□□ -1.03
AC116563.1-201ENST00000505454 PROM2Q8N271 834 aa8.52□□□□□ -1.05
AC116563.1-201ENST00000505454 TSPYL2Q9H2G4 693 aaPredicted RBP8.51□□□□□ -1.05
AC116563.1-201ENST00000505454 PELP1Q8IZL8 1130 aaKnown RBP8.47□□□□□ -1.05
AC116563.1-201ENST00000505454 MIER1Q8N108 512 aa8.47□□□□□ -1.05
AC116563.1-201ENST00000505454 MS4A3Q96HJ5 214 aa8.47□□□□□ -1.05
AC116563.1-201ENST00000505454 POTEB2H3BUK9 544 aa8.45□□□□□ -1.06
AC116563.1-201ENST00000505454 PLEKHG5O94827 1062 aa8.44□□□□□ -1.06
AC116563.1-201ENST00000505454 OTUD5Q96G74 571 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms