RNA–Protein interactions for RNA: ENST00000411259.1

RNU6-293P-201, Transcript of RNA, U6 small nuclear 293, pseudogene, humanhuman

BASIC

Gene RNU6-293P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-293P-201ENST00000411259 AEBP2Q6ZN18 517 aaPredicted RBP17■□□□□ 0.31
RNU6-293P-201ENST00000411259 CHIC1Q5VXU3 224 aa16.4■□□□□ 0.22
RNU6-293P-201ENST00000411259 PHF23Q9BUL5 403 aaPredicted RBP14.5□□□□□ -0.09
RNU6-293P-201ENST00000411259 SENP3Q9H4L4 574 aaPredicted RBP14.29□□□□□ -0.12
RNU6-293P-201ENST00000411259 FOXD1Q16676 465 aa13.36□□□□□ -0.27
RNU6-293P-201ENST00000411259 PLPPR3Q6T4P5 718 aa13.19□□□□□ -0.3
RNU6-293P-201ENST00000411259 PPP6R1Q9UPN7 881 aa12.82□□□□□ -0.36
RNU6-293P-201ENST00000411259 ADRA2BP18089 450 aa12.74□□□□□ -0.37
RNU6-293P-201ENST00000411259 PIAS4Q8N2W9 510 aaPredicted RBP12.48□□□□□ -0.41
RNU6-293P-201ENST00000411259 MSH5O43196 834 aa12.25□□□□□ -0.45
RNU6-293P-201ENST00000411259 PPP4R3CPQ6ZMV5 832 aa11.64□□□□□ -0.55
RNU6-293P-201ENST00000411259 MAPK8IP2Q13387 824 aaPredicted RBP11.61□□□□□ -0.55
RNU6-293P-201ENST00000411259 SCAF1Q9H7N4 1312 aaKnown RBP11.49□□□□□ -0.57
RNU6-293P-201ENST00000411259 POTEDQ86YR6 584 aa11.44□□□□□ -0.58
RNU6-293P-201ENST00000411259 DMRT2Q9Y5R5 561 aa11.44□□□□□ -0.58
RNU6-293P-201ENST00000411259 CNKSR2Q8WXI2 1034 aa11.31□□□□□ -0.6
RNU6-293P-201ENST00000411259 KCNA4P22459 653 aa11.3□□□□□ -0.6
RNU6-293P-201ENST00000411259 NCBP3Q53F19 620 aaKnown RBP11.19□□□□□ -0.62
RNU6-293P-201ENST00000411259 NPM3O75607 178 aaKnown RBP11.18□□□□□ -0.62
RNU6-293P-201ENST00000411259 HOXD11P31277 338 aaPredicted RBP11.18□□□□□ -0.62
RNU6-293P-201ENST00000411259 RNF216Q9NWF9 866 aaPredicted RBP11.14□□□□□ -0.63
RNU6-293P-201ENST00000411259 DNAJC5BQ9UF47 199 aa10.94□□□□□ -0.66
RNU6-293P-201ENST00000411259 DCAF8L1A6NGE4 600 aa10.79□□□□□ -0.68
RNU6-293P-201ENST00000411259 SLC4A1APQ9BWU0 796 aaKnown RBP10.65□□□□□ -0.7
RNU6-293P-201ENST00000411259 SLC4A2P04920 1241 aa10.64□□□□□ -0.71
RNU6-293P-201ENST00000411259 RNF39Q9H2S5 420 aa10.59□□□□□ -0.71
RNU6-293P-201ENST00000411259 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.52□□□□□ -0.73
RNU6-293P-201ENST00000411259 ZBTB22O15209 634 aa10.49□□□□□ -0.73
RNU6-293P-201ENST00000411259 U3KPZ7 1027 aaPredicted RBP10.47□□□□□ -0.73
RNU6-293P-201ENST00000411259 C1QBPQ07021 282 aaKnown RBP10.37□□□□□ -0.75
RNU6-293P-201ENST00000411259 FOXD4L1Q9NU39 408 aa10.36□□□□□ -0.75
RNU6-293P-201ENST00000411259 MYCNP04198 464 aaPredicted RBP10.26□□□□□ -0.77
RNU6-293P-201ENST00000411259 CACNB1Q02641 598 aaPredicted RBP10.26□□□□□ -0.77
RNU6-293P-201ENST00000411259 CSRNP3Q8WYN3 585 aa10.25□□□□□ -0.77
RNU6-293P-201ENST00000411259 EHMT2Q96KQ7 1210 aa10.22□□□□□ -0.77
RNU6-293P-201ENST00000411259 SPINK5Q9NQ38 1064 aaPredicted RBP10.21□□□□□ -0.77
RNU6-293P-201ENST00000411259 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.13□□□□□ -0.79
RNU6-293P-201ENST00000411259 HNRNPUL2Q1KMD3 747 aaKnown RBP10.13□□□□□ -0.79
RNU6-293P-201ENST00000411259 SAMD1Q6SPF0 538 aaPredicted RBP10.13□□□□□ -0.79
RNU6-293P-201ENST00000411259 ATF5Q9Y2D1 282 aaPredicted RBP10.12□□□□□ -0.79
RNU6-293P-201ENST00000411259 CAPN15O75808 1086 aa10.05□□□□□ -0.8
RNU6-293P-201ENST00000411259 DSG3P32926 999 aa10.02□□□□□ -0.81
RNU6-293P-201ENST00000411259 ATXN8OSP0DMR3 200 aa10.01□□□□□ -0.81
RNU6-293P-201ENST00000411259 APLP2Q06481 763 aa10□□□□□ -0.81
RNU6-293P-201ENST00000411259 TRHP20396 242 aaPredicted RBP9.98□□□□□ -0.81
RNU6-293P-201ENST00000411259 ZNF219Q9P2Y4 722 aaPredicted RBP9.98□□□□□ -0.81
RNU6-293P-201ENST00000411259 ABCB7O75027 752 aa9.9□□□□□ -0.82
RNU6-293P-201ENST00000411259 POLA2Q14181 598 aa9.84□□□□□ -0.83
RNU6-293P-201ENST00000411259 MKRN4PQ13434 485 aaPredicted RBP9.69□□□□□ -0.86
RNU6-293P-201ENST00000411259 ZBTB12Q9Y330 459 aaPredicted RBP9.59□□□□□ -0.87
RNU6-293P-201ENST00000411259 OSCARQ8IYS5 282 aa9.54□□□□□ -0.88
RNU6-293P-201ENST00000411259 FBLN2P98095 1184 aa9.49□□□□□ -0.89
RNU6-293P-201ENST00000411259 RBM42Q9BTD8 480 aaKnown RBP9.42□□□□□ -0.9
RNU6-293P-201ENST00000411259 SSUH2Q9Y2M2 353 aa9.39□□□□□ -0.91
RNU6-293P-201ENST00000411259 SPDYE2BA6NHP3 402 aa9.38□□□□□ -0.91
RNU6-293P-201ENST00000411259 SPDYE6P0CI01 402 aa9.38□□□□□ -0.91
RNU6-293P-201ENST00000411259 SPDYE2Q495Y8 402 aa9.38□□□□□ -0.91
RNU6-293P-201ENST00000411259 AKT1S1Q96B36 256 aa9.34□□□□□ -0.91
RNU6-293P-201ENST00000411259 ZNF692Q9BU19 519 aaPredicted RBP9.3□□□□□ -0.92
RNU6-293P-201ENST00000411259 REM2Q8IYK8 340 aaPredicted RBP9.29□□□□□ -0.92
RNU6-293P-201ENST00000411259 SPDYE4A6NLX3 237 aa9.28□□□□□ -0.92
RNU6-293P-201ENST00000411259 PROM2Q8N271 834 aa9.26□□□□□ -0.93
RNU6-293P-201ENST00000411259 PABPN1Q86U42 306 aaKnown RBP eCLIP9.21□□□□□ -0.94
RNU6-293P-201ENST00000411259 PITPNM1O00562 1244 aa9.2□□□□□ -0.94
RNU6-293P-201ENST00000411259 FKBP8Q14318 412 aa9.18□□□□□ -0.94
RNU6-293P-201ENST00000411259 CHRDL2Q6WN34 429 aa9.15□□□□□ -0.94
RNU6-293P-201ENST00000411259 SPDYE1Q8NFV5 336 aaPredicted RBP9.1□□□□□ -0.95
RNU6-293P-201ENST00000411259 FXR2P51116 673 aaKnown RBP eCLIP9.06□□□□□ -0.96
RNU6-293P-201ENST00000411259 PIP4P2Q8N4L2 257 aa9.04□□□□□ -0.96
RNU6-293P-201ENST00000411259 CLEC11AQ9Y240 323 aa9.03□□□□□ -0.96
RNU6-293P-201ENST00000411259 POTEHQ6S545 545 aa8.99□□□□□ -0.97
RNU6-293P-201ENST00000411259 STAG3Q9UJ98 1225 aa8.95□□□□□ -0.98
RNU6-293P-201ENST00000411259 PRR29P0C7W0 189 aa8.94□□□□□ -0.98
RNU6-293P-201ENST00000411259 CREBZFQ9NS37 354 aa8.94□□□□□ -0.98
RNU6-293P-201ENST00000411259 CHADLQ6NUI6 762 aa8.92□□□□□ -0.98
RNU6-293P-201ENST00000411259 PRKAR2AP13861 404 aaKnown RBP8.91□□□□□ -0.98
RNU6-293P-201ENST00000411259 MNX1P50219 401 aaPredicted RBP8.9□□□□□ -0.98
RNU6-293P-201ENST00000411259 FARP1Q9Y4F1 1045 aaPredicted RBP8.82□□□□□ -1
RNU6-293P-201ENST00000411259 FBXO3Q9UK99 471 aa8.81□□□□□ -1
RNU6-293P-201ENST00000411259 VASPP50552 380 aaPredicted RBP8.79□□□□□ -1
RNU6-293P-201ENST00000411259 EVX2Q03828 476 aa8.78□□□□□ -1
RNU6-293P-201ENST00000411259 C19orf67A6NJJ6 358 aa8.76□□□□□ -1.01
RNU6-293P-201ENST00000411259 MIER1Q8N108 512 aa8.75□□□□□ -1.01
RNU6-293P-201ENST00000411259 IFNLR1Q8IU57 520 aaPredicted RBP8.72□□□□□ -1.01
RNU6-293P-201ENST00000411259 PLCD3Q8N3E9 789 aa8.7□□□□□ -1.02
RNU6-293P-201ENST00000411259 NUBP1P53384 320 aa8.68□□□□□ -1.02
RNU6-293P-201ENST00000411259 HAX1O00165 279 aa8.67□□□□□ -1.02
RNU6-293P-201ENST00000411259 RASEFQ8IZ41 740 aa8.66□□□□□ -1.02
RNU6-293P-201ENST00000411259 CD44P16070 742 aaKnown RBP8.64□□□□□ -1.03
RNU6-293P-201ENST00000411259 NPM1P06748 294 aaKnown RBP eCLIP8.63□□□□□ -1.03
RNU6-293P-201ENST00000411259 SP7Q8TDD2 431 aaPredicted RBP8.6□□□□□ -1.03
RNU6-293P-201ENST00000411259 PLEKHG5O94827 1062 aa8.59□□□□□ -1.03
RNU6-293P-201ENST00000411259 ZNF579Q8NAF0 562 aaKnown RBP8.59□□□□□ -1.03
RNU6-293P-201ENST00000411259 ZBTB47Q9UFB7 747 aaPredicted RBP8.59□□□□□ -1.03
RNU6-293P-201ENST00000411259 CCDC61Q9Y6R9 512 aa8.58□□□□□ -1.04
RNU6-293P-201ENST00000411259 ZRANB1Q9UGI0 708 aa8.55□□□□□ -1.04
RNU6-293P-201ENST00000411259 KLHL34Q8N239 644 aa8.54□□□□□ -1.04
RNU6-293P-201ENST00000411259 PHF12Q96QT6 1004 aa8.54□□□□□ -1.04
RNU6-293P-201ENST00000411259 TSPYL2Q9H2G4 693 aaPredicted RBP8.54□□□□□ -1.04
RNU6-293P-201ENST00000411259 SPOCK2Q92563 424 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms