RNA–Protein interactions for RNA: ENST00000314742.12

LINS1-201, Transcript of lines homolog 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LINS1, Length 4,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1-201ENST00000314742 NISCHQ9Y2I1 1504 aa9.27□□□□□ -0.93
LINS1-201ENST00000314742 SLC24A1O60721 1099 aa8.97□□□□□ -0.97
LINS1-201ENST00000314742 EHMT2Q96KQ7 1210 aa8.73□□□□□ -1.01
LINS1-201ENST00000314742 CHIC1Q5VXU3 224 aa8.58□□□□□ -1.04
LINS1-201ENST00000314742 PLPPR3Q6T4P5 718 aa8.11□□□□□ -1.11
LINS1-201ENST00000314742 RTN4Q9NQC3 1192 aaKnown RBP8.09□□□□□ -1.12
LINS1-201ENST00000314742 MYT1Q01538 1121 aa8.07□□□□□ -1.12
LINS1-201ENST00000314742 CCDC180Q9P1Z9 1646 aa8.05□□□□□ -1.12
LINS1-201ENST00000314742 DAXXQ9UER7 740 aaPredicted RBP8.04□□□□□ -1.12
LINS1-201ENST00000314742 AMER1Q5JTC6 1135 aaPredicted RBP7.97□□□□□ -1.13
LINS1-201ENST00000314742 PELP1Q8IZL8 1130 aaKnown RBP7.96□□□□□ -1.14
LINS1-201ENST00000314742 RANGAP1P46060 587 aaPredicted RBP7.95□□□□□ -1.14
LINS1-201ENST00000314742 ERICH6Q7L0X2 663 aa7.93□□□□□ -1.14
LINS1-201ENST00000314742 AEBP2Q6ZN18 517 aaPredicted RBP7.91□□□□□ -1.14
LINS1-201ENST00000314742 ZCCHC6Q5VYS8 1495 aaKnown RBP7.9□□□□□ -1.15
LINS1-201ENST00000314742 NCBP3Q53F19 620 aaKnown RBP7.89□□□□□ -1.15
LINS1-201ENST00000314742 TTBK1Q5TCY1 1321 aaPredicted RBP7.89□□□□□ -1.15
LINS1-201ENST00000314742 PRKCSHP14314 528 aaPredicted RBP7.84□□□□□ -1.15
LINS1-201ENST00000314742 KCNA4P22459 653 aa7.75□□□□□ -1.17
LINS1-201ENST00000314742 CSRNP3Q8WYN3 585 aa7.68□□□□□ -1.18
LINS1-201ENST00000314742 TULP1O00294 542 aaPredicted RBP7.65□□□□□ -1.18
LINS1-201ENST00000314742 DCAF1Q9Y4B6 1507 aa7.65□□□□□ -1.18
LINS1-201ENST00000314742 UNC13AQ9UPW8 1703 aa7.62□□□□□ -1.19
LINS1-201ENST00000314742 ARXQ96QS3 562 aa7.62□□□□□ -1.19
LINS1-201ENST00000314742 PHF23Q9BUL5 403 aaPredicted RBP7.61□□□□□ -1.19
LINS1-201ENST00000314742 TPRNQ4KMQ1 711 aa7.58□□□□□ -1.2
LINS1-201ENST00000314742 SLC4A1APQ9BWU0 796 aaKnown RBP7.58□□□□□ -1.2
LINS1-201ENST00000314742 HAP1P54257 671 aaPredicted RBP7.58□□□□□ -1.2
LINS1-201ENST00000314742 HOMEZQ8IX15 550 aa7.57□□□□□ -1.2
LINS1-201ENST00000314742 BCANQ96GW7 911 aa7.56□□□□□ -1.2
LINS1-201ENST00000314742 TIMELESSQ9UNS1 1208 aa7.55□□□□□ -1.2
LINS1-201ENST00000314742 DCAF8L2P0C7V8 631 aa7.55□□□□□ -1.2
LINS1-201ENST00000314742 PODXL2Q9NZ53 605 aa7.52□□□□□ -1.21
LINS1-201ENST00000314742 TAOK2Q9UL54 1235 aa7.52□□□□□ -1.21
LINS1-201ENST00000314742 SHROOM4Q9ULL8 1493 aa7.51□□□□□ -1.21
LINS1-201ENST00000314742 MYO15BQ96JP2 1530 aa7.5□□□□□ -1.21
LINS1-201ENST00000314742 ABCC9O60706 1549 aa7.47□□□□□ -1.21
LINS1-201ENST00000314742 EIF5BO60841 1220 aaKnown RBP7.47□□□□□ -1.21
LINS1-201ENST00000314742 EIF4G1Q04637 1599 aaKnown RBP7.43□□□□□ -1.22
LINS1-201ENST00000314742 APLP2Q06481 763 aa7.43□□□□□ -1.22
LINS1-201ENST00000314742 SCRIBQ14160 1630 aa7.41□□□□□ -1.22
LINS1-201ENST00000314742 C14orf37Q86TY3 774 aa7.37□□□□□ -1.23
LINS1-201ENST00000314742 BICRAQ9NZM4 1560 aa7.35□□□□□ -1.23
LINS1-201ENST00000314742 GTF3C3Q9Y5Q9 886 aa7.34□□□□□ -1.23
LINS1-201ENST00000314742 RB1CC1Q8TDY2 1594 aa7.33□□□□□ -1.24
LINS1-201ENST00000314742 NPM2Q86SE8 214 aaKnown RBP7.32□□□□□ -1.24
LINS1-201ENST00000314742 WIZO95785 1651 aa7.31□□□□□ -1.24
LINS1-201ENST00000314742 CECR2Q9BXF3 1484 aa7.3□□□□□ -1.24
LINS1-201ENST00000314742 PLCB2Q00722 1185 aa7.29□□□□□ -1.24
LINS1-201ENST00000314742 KLHL34Q8N239 644 aa7.28□□□□□ -1.24
LINS1-201ENST00000314742 NACADO15069 1562 aa7.28□□□□□ -1.24
LINS1-201ENST00000314742 MROH2BQ7Z745 1585 aa7.28□□□□□ -1.24
LINS1-201ENST00000314742 RSF1Q96T23 1441 aaPredicted RBP7.26□□□□□ -1.25
LINS1-201ENST00000314742 SUPT5HO00267 1087 aaKnown RBP7.23□□□□□ -1.25
LINS1-201ENST00000314742 FKBP8Q14318 412 aa7.21□□□□□ -1.25
LINS1-201ENST00000314742 BAZ1AQ9NRL2 1556 aaPredicted RBP7.18□□□□□ -1.26
LINS1-201ENST00000314742 SMARCA4P51532 1647 aa7.16□□□□□ -1.26
LINS1-201ENST00000314742 PEG3Q9GZU2 1588 aa7.13□□□□□ -1.27
LINS1-201ENST00000314742 SMARCA2P51531 1590 aa7.11□□□□□ -1.27
LINS1-201ENST00000314742 ADRA2BP18089 450 aa7.08□□□□□ -1.28
LINS1-201ENST00000314742 NBR1Q14596 966 aa7.08□□□□□ -1.28
LINS1-201ENST00000314742 TMEM132AQ24JP5 1023 aa7.06□□□□□ -1.28
LINS1-201ENST00000314742 POLR3GLQ9BT43 218 aa7.06□□□□□ -1.28
LINS1-201ENST00000314742 FBXO3Q9UK99 471 aa7.04□□□□□ -1.28
LINS1-201ENST00000314742 VSIG10Q8N0Z9 540 aa7.04□□□□□ -1.28
LINS1-201ENST00000314742 TOP2AP11388 1531 aaKnown RBP7.03□□□□□ -1.28
LINS1-201ENST00000314742 CDK11BP21127 795 aaKnown RBP7.03□□□□□ -1.28
LINS1-201ENST00000314742 CDK11AQ9UQ88 783 aaPredicted RBP7.03□□□□□ -1.28
LINS1-201ENST00000314742 CFAP44Q96MT7 982 aa7.02□□□□□ -1.29
LINS1-201ENST00000314742 ARID3AQ99856 593 aa7.02□□□□□ -1.29
LINS1-201ENST00000314742 ABCC8Q09428 1581 aa7.01□□□□□ -1.29
LINS1-201ENST00000314742 CCDC88BA6NC98 1476 aa6.99□□□□□ -1.29
LINS1-201ENST00000314742 TRIM26Q12899 539 aaPredicted RBP6.99□□□□□ -1.29
LINS1-201ENST00000314742 PLEKHG5O94827 1062 aa6.97□□□□□ -1.29
LINS1-201ENST00000314742 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.96□□□□□ -1.3
LINS1-201ENST00000314742 SYNJ1O43426 1573 aa6.95□□□□□ -1.3
LINS1-201ENST00000314742 FAM9AQ8IZU1 332 aaPredicted RBP6.95□□□□□ -1.3
LINS1-201ENST00000314742 PRDM2Q13029 1718 aa6.94□□□□□ -1.3
LINS1-201ENST00000314742 RUSC2Q8N2Y8 1516 aa6.93□□□□□ -1.3
LINS1-201ENST00000314742 PAXIP1Q6ZW49 1069 aaPredicted RBP6.92□□□□□ -1.3
LINS1-201ENST00000314742 ZBTB22O15209 634 aa6.92□□□□□ -1.3
LINS1-201ENST00000314742 FBLN2P98095 1184 aa6.92□□□□□ -1.3
LINS1-201ENST00000314742 UBTFP17480 764 aaKnown RBP6.91□□□□□ -1.3
LINS1-201ENST00000314742 LOC105371045A0A1W2PR82 267 aa6.9□□□□□ -1.3
LINS1-201ENST00000314742 HMGB1P09429 215 aaKnown RBP6.88□□□□□ -1.31
LINS1-201ENST00000314742 BIVM-ERCC5R4GMW8 1640 aa6.88□□□□□ -1.31
LINS1-201ENST00000314742 ATAD2BQ9ULI0 1458 aa6.88□□□□□ -1.31
LINS1-201ENST00000314742 KDM2AQ9Y2K7 1162 aa6.85□□□□□ -1.31
LINS1-201ENST00000314742 CCDC9Q9Y3X0 531 aaKnown RBP6.85□□□□□ -1.31
LINS1-201ENST00000314742 ZBTB7CA1YPR0 619 aa6.84□□□□□ -1.31
LINS1-201ENST00000314742 NPM3O75607 178 aaKnown RBP6.84□□□□□ -1.31
LINS1-201ENST00000314742 PDIA4P13667 645 aaKnown RBP6.83□□□□□ -1.32
LINS1-201ENST00000314742 SOGA1O94964 1423 aa6.82□□□□□ -1.32
LINS1-201ENST00000314742 MYT1LQ9UL68 1186 aa6.81□□□□□ -1.32
LINS1-201ENST00000314742 HMGXB3Q12766 1538 aa6.8□□□□□ -1.32
LINS1-201ENST00000314742 NEFLP07196 543 aa6.8□□□□□ -1.32
LINS1-201ENST00000314742 PABPN1Q86U42 306 aaKnown RBP eCLIP6.8□□□□□ -1.32
LINS1-201ENST00000314742 TOP2BQ02880 1626 aa6.8□□□□□ -1.32
LINS1-201ENST00000314742 LRRIQ1Q96JM4 1722 aa6.8□□□□□ -1.32
LINS1-201ENST00000314742 WDR97A6NE52 1622 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms