RNA–Protein interactions for RNA: ENST00000518729.1

IGKV2-23-201, Transcript of immunoglobulin kappa variable 2-23 (pseudogene), humanhuman

BASIC

Gene IGKV2-23, Length 323 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2-23-201ENST00000518729 AEBP2Q6ZN18 517 aaPredicted RBP17.26■□□□□ 0.35
IGKV2-23-201ENST00000518729 CHIC1Q5VXU3 224 aa16.37■□□□□ 0.21
IGKV2-23-201ENST00000518729 SENP3Q9H4L4 574 aaPredicted RBP14.72□□□□□ -0.05
IGKV2-23-201ENST00000518729 PHF23Q9BUL5 403 aaPredicted RBP14.53□□□□□ -0.08
IGKV2-23-201ENST00000518729 FOXD1Q16676 465 aa13.72□□□□□ -0.21
IGKV2-23-201ENST00000518729 PLPPR3Q6T4P5 718 aa13.07□□□□□ -0.32
IGKV2-23-201ENST00000518729 MSH5O43196 834 aa12.85□□□□□ -0.35
IGKV2-23-201ENST00000518729 PPP6R1Q9UPN7 881 aa12.82□□□□□ -0.36
IGKV2-23-201ENST00000518729 PIAS4Q8N2W9 510 aaPredicted RBP12.8□□□□□ -0.36
IGKV2-23-201ENST00000518729 ADRA2BP18089 450 aa12.76□□□□□ -0.37
IGKV2-23-201ENST00000518729 POTEDQ86YR6 584 aa12.58□□□□□ -0.4
IGKV2-23-201ENST00000518729 MAPK8IP2Q13387 824 aaPredicted RBP11.72□□□□□ -0.53
IGKV2-23-201ENST00000518729 SCAF1Q9H7N4 1312 aaKnown RBP11.69□□□□□ -0.54
IGKV2-23-201ENST00000518729 DMRT2Q9Y5R5 561 aa11.68□□□□□ -0.54
IGKV2-23-201ENST00000518729 PPP4R3CPQ6ZMV5 832 aa11.44□□□□□ -0.58
IGKV2-23-201ENST00000518729 HOXD11P31277 338 aaPredicted RBP11.25□□□□□ -0.61
IGKV2-23-201ENST00000518729 CNKSR2Q8WXI2 1034 aa11.25□□□□□ -0.61
IGKV2-23-201ENST00000518729 DNAJC5Q9H3Z4 198 aa11.17□□□□□ -0.62
IGKV2-23-201ENST00000518729 DCAF8L1A6NGE4 600 aa11.15□□□□□ -0.62
IGKV2-23-201ENST00000518729 RNF216Q9NWF9 866 aaPredicted RBP11.15□□□□□ -0.62
IGKV2-23-201ENST00000518729 CACNB1Q02641 598 aaPredicted RBP11.02□□□□□ -0.65
IGKV2-23-201ENST00000518729 NCBP3Q53F19 620 aaKnown RBP10.99□□□□□ -0.65
IGKV2-23-201ENST00000518729 RNF39Q9H2S5 420 aa10.97□□□□□ -0.65
IGKV2-23-201ENST00000518729 DNAJC5BQ9UF47 199 aa10.93□□□□□ -0.66
IGKV2-23-201ENST00000518729 NPM3O75607 178 aaKnown RBP10.85□□□□□ -0.67
IGKV2-23-201ENST00000518729 C1QBPQ07021 282 aaKnown RBP10.81□□□□□ -0.68
IGKV2-23-201ENST00000518729 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.68□□□□□ -0.7
IGKV2-23-201ENST00000518729 KCNA4P22459 653 aa10.61□□□□□ -0.71
IGKV2-23-201ENST00000518729 U3KPZ7 1027 aaPredicted RBP10.48□□□□□ -0.73
IGKV2-23-201ENST00000518729 ABCC9O60706 1549 aa10.38□□□□□ -0.75
IGKV2-23-201ENST00000518729 SLC4A2P04920 1241 aa10.37□□□□□ -0.75
IGKV2-23-201ENST00000518729 SPINK5Q9NQ38 1064 aaPredicted RBP10.32□□□□□ -0.76
IGKV2-23-201ENST00000518729 CAPN15O75808 1086 aa10.29□□□□□ -0.76
IGKV2-23-201ENST00000518729 DSG3P32926 999 aa10.27□□□□□ -0.77
IGKV2-23-201ENST00000518729 APLP2Q06481 763 aa10.18□□□□□ -0.78
IGKV2-23-201ENST00000518729 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.17□□□□□ -0.78
IGKV2-23-201ENST00000518729 HNRNPUL2Q1KMD3 747 aaKnown RBP10.17□□□□□ -0.78
IGKV2-23-201ENST00000518729 ZNF219Q9P2Y4 722 aaPredicted RBP10.13□□□□□ -0.79
IGKV2-23-201ENST00000518729 TRHP20396 242 aaPredicted RBP10.12□□□□□ -0.79
IGKV2-23-201ENST00000518729 SAMD1Q6SPF0 538 aaPredicted RBP10.11□□□□□ -0.79
IGKV2-23-201ENST00000518729 ABCB7O75027 752 aa10.04□□□□□ -0.8
IGKV2-23-201ENST00000518729 MYCNP04198 464 aaPredicted RBP10.03□□□□□ -0.8
IGKV2-23-201ENST00000518729 SLC4A1APQ9BWU0 796 aaKnown RBP10□□□□□ -0.81
IGKV2-23-201ENST00000518729 TRIM41Q8WV44 630 aa9.98□□□□□ -0.81
IGKV2-23-201ENST00000518729 FOXD4L1Q9NU39 408 aa9.92□□□□□ -0.82
IGKV2-23-201ENST00000518729 NISCHQ9Y2I1 1504 aa9.87□□□□□ -0.83
IGKV2-23-201ENST00000518729 POLA2Q14181 598 aa9.86□□□□□ -0.83
IGKV2-23-201ENST00000518729 POTEHQ6S545 545 aa9.85□□□□□ -0.83
IGKV2-23-201ENST00000518729 ATF5Q9Y2D1 282 aaPredicted RBP9.8□□□□□ -0.84
IGKV2-23-201ENST00000518729 RBM42Q9BTD8 480 aaKnown RBP9.79□□□□□ -0.84
IGKV2-23-201ENST00000518729 ZBTB22O15209 634 aa9.76□□□□□ -0.85
IGKV2-23-201ENST00000518729 ILDR1Q86SU0 546 aaPredicted RBP9.76□□□□□ -0.85
IGKV2-23-201ENST00000518729 CUX2O14529 1486 aa9.67□□□□□ -0.86
IGKV2-23-201ENST00000518729 ZBTB12Q9Y330 459 aaPredicted RBP9.66□□□□□ -0.86
IGKV2-23-201ENST00000518729 ATXN8OSP0DMR3 200 aa9.63□□□□□ -0.87
IGKV2-23-201ENST00000518729 CECR2Q9BXF3 1484 aa9.58□□□□□ -0.88
IGKV2-23-201ENST00000518729 CHRDL2Q6WN34 429 aa9.57□□□□□ -0.88
IGKV2-23-201ENST00000518729 AKT1S1Q96B36 256 aa9.57□□□□□ -0.88
IGKV2-23-201ENST00000518729 PABPN1Q86U42 306 aaKnown RBP eCLIP9.54□□□□□ -0.88
IGKV2-23-201ENST00000518729 OSCARQ8IYS5 282 aa9.54□□□□□ -0.88
IGKV2-23-201ENST00000518729 REM2Q8IYK8 340 aaPredicted RBP9.47□□□□□ -0.89
IGKV2-23-201ENST00000518729 FBLN2P98095 1184 aa9.4□□□□□ -0.9
IGKV2-23-201ENST00000518729 RB1CC1Q8TDY2 1594 aa9.4□□□□□ -0.9
IGKV2-23-201ENST00000518729 SPDYE2BA6NHP3 402 aa9.37□□□□□ -0.91
IGKV2-23-201ENST00000518729 SPDYE6P0CI01 402 aa9.37□□□□□ -0.91
IGKV2-23-201ENST00000518729 SPDYE2Q495Y8 402 aa9.37□□□□□ -0.91
IGKV2-23-201ENST00000518729 PITPNM1O00562 1244 aa9.36□□□□□ -0.91
IGKV2-23-201ENST00000518729 MKRN4PQ13434 485 aaPredicted RBP9.35□□□□□ -0.91
IGKV2-23-201ENST00000518729 PIP4P2Q8N4L2 257 aa9.34□□□□□ -0.91
IGKV2-23-201ENST00000518729 CC2D2AQ9P2K1 1620 aa9.32□□□□□ -0.92
IGKV2-23-201ENST00000518729 FXR2P51116 673 aaKnown RBP eCLIP9.3□□□□□ -0.92
IGKV2-23-201ENST00000518729 CSRNP3Q8WYN3 585 aa9.3□□□□□ -0.92
IGKV2-23-201ENST00000518729 SOCS7O14512 581 aa9.26□□□□□ -0.93
IGKV2-23-201ENST00000518729 SSUH2Q9Y2M2 353 aa9.25□□□□□ -0.93
IGKV2-23-201ENST00000518729 ZNF692Q9BU19 519 aaPredicted RBP9.24□□□□□ -0.93
IGKV2-23-201ENST00000518729 SP7Q8TDD2 431 aaPredicted RBP9.23□□□□□ -0.93
IGKV2-23-201ENST00000518729 SPDYE1Q8NFV5 336 aaPredicted RBP9.2□□□□□ -0.94
IGKV2-23-201ENST00000518729 LMTK3Q96Q04 1460 aa9.17□□□□□ -0.94
IGKV2-23-201ENST00000518729 HAX1O00165 279 aa9.17□□□□□ -0.94
IGKV2-23-201ENST00000518729 CLEC11AQ9Y240 323 aa9.17□□□□□ -0.94
IGKV2-23-201ENST00000518729 CCDC180Q9P1Z9 1646 aa9.16□□□□□ -0.94
IGKV2-23-201ENST00000518729 ERCC6Q03468 1493 aa9.14□□□□□ -0.95
IGKV2-23-201ENST00000518729 PRKAR2AP13861 404 aaKnown RBP9.12□□□□□ -0.95
IGKV2-23-201ENST00000518729 EHMT2Q96KQ7 1210 aa9.12□□□□□ -0.95
IGKV2-23-201ENST00000518729 SHROOM4Q9ULL8 1493 aa9.08□□□□□ -0.96
IGKV2-23-201ENST00000518729 BICRAQ9NZM4 1560 aa9.07□□□□□ -0.96
IGKV2-23-201ENST00000518729 EVX2Q03828 476 aa9.07□□□□□ -0.96
IGKV2-23-201ENST00000518729 NACADO15069 1562 aa9.04□□□□□ -0.96
IGKV2-23-201ENST00000518729 PRR29P0C7W0 189 aa9.03□□□□□ -0.96
IGKV2-23-201ENST00000518729 FBXO41Q8TF61 875 aa9.03□□□□□ -0.96
IGKV2-23-201ENST00000518729 EIF4G1Q04637 1599 aaKnown RBP9.01□□□□□ -0.97
IGKV2-23-201ENST00000518729 CHADLQ6NUI6 762 aa9.01□□□□□ -0.97
IGKV2-23-201ENST00000518729 C19orf67A6NJJ6 358 aa9□□□□□ -0.97
IGKV2-23-201ENST00000518729 UNC13AQ9UPW8 1703 aa8.95□□□□□ -0.98
IGKV2-23-201ENST00000518729 ILDR2Q71H61 639 aa8.92□□□□□ -0.98
IGKV2-23-201ENST00000518729 SPDYE4A6NLX3 237 aa8.88□□□□□ -0.99
IGKV2-23-201ENST00000518729 FARP1Q9Y4F1 1045 aaPredicted RBP8.88□□□□□ -0.99
IGKV2-23-201ENST00000518729 RIMBP3CA6NJZ7 1639 aa8.87□□□□□ -0.99
IGKV2-23-201ENST00000518729 RIMBP3BA6NNM3 1639 aa8.87□□□□□ -0.99
IGKV2-23-201ENST00000518729 RIMBP3Q9UFD9 1639 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms