Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CYP46A1Q9Y6A2 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CYP46A1Q9Y6A2 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CYP46A1Q9Y6A2 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC22.62■■□□□ 1.21
CYP46A1Q9Y6A2 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CYP46A1Q9Y6A2 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
CYP46A1Q9Y6A2 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CYP46A1Q9Y6A2 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC22.62■■□□□ 1.21
CYP46A1Q9Y6A2 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
CYP46A1Q9Y6A2 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CYP46A1Q9Y6A2 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC22.62■■□□□ 1.21
CYP46A1Q9Y6A2 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
CYP46A1Q9Y6A2 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CYP46A1Q9Y6A2 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CYP46A1Q9Y6A2 Z85996.1-201ENST00000494644 937 ntBASIC22.62■■□□□ 1.21
CYP46A1Q9Y6A2 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
CYP46A1Q9Y6A2 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC22.62■■□□□ 1.21
CYP46A1Q9Y6A2 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
CYP46A1Q9Y6A2 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CYP46A1Q9Y6A2 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CYP46A1Q9Y6A2 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CYP46A1Q9Y6A2 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CYP46A1Q9Y6A2 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC22.62■■□□□ 1.21
CYP46A1Q9Y6A2 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC22.61■■□□□ 1.21
CYP46A1Q9Y6A2 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CYP46A1Q9Y6A2 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CYP46A1Q9Y6A2 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC22.61■■□□□ 1.21
CYP46A1Q9Y6A2 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC22.61■■□□□ 1.21
CYP46A1Q9Y6A2 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC22.61■■□□□ 1.21
CYP46A1Q9Y6A2 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CYP46A1Q9Y6A2 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC22.61■■□□□ 1.21
CYP46A1Q9Y6A2 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CYP46A1Q9Y6A2 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC22.61■■□□□ 1.21
CYP46A1Q9Y6A2 AL445675.2-201ENST00000620291 557 ntBASIC22.61■■□□□ 1.21
CYP46A1Q9Y6A2 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
CYP46A1Q9Y6A2 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CYP46A1Q9Y6A2 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CYP46A1Q9Y6A2 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC22.61■■□□□ 1.21
CYP46A1Q9Y6A2 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CYP46A1Q9Y6A2 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC22.61■■□□□ 1.21
CYP46A1Q9Y6A2 AL031598.1-201ENST00000561511 1773 ntBASIC22.61■■□□□ 1.21
CYP46A1Q9Y6A2 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
CYP46A1Q9Y6A2 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CYP46A1Q9Y6A2 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC22.6■■□□□ 1.21
CYP46A1Q9Y6A2 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC22.6■■□□□ 1.21
CYP46A1Q9Y6A2 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CYP46A1Q9Y6A2 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CYP46A1Q9Y6A2 AC093525.10-201ENST00000625130 1569 ntBASIC22.6■■□□□ 1.21
CYP46A1Q9Y6A2 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
CYP46A1Q9Y6A2 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC22.6■■□□□ 1.21
CYP46A1Q9Y6A2 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CYP46A1Q9Y6A2 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC22.6■■□□□ 1.21
CYP46A1Q9Y6A2 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
CYP46A1Q9Y6A2 C1QBPP2-201ENST00000528754 825 ntBASIC22.6■■□□□ 1.21
CYP46A1Q9Y6A2 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC22.6■■□□□ 1.21
CYP46A1Q9Y6A2 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CYP46A1Q9Y6A2 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC22.6■■□□□ 1.21
CYP46A1Q9Y6A2 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
CYP46A1Q9Y6A2 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CYP46A1Q9Y6A2 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
CYP46A1Q9Y6A2 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC22.6■■□□□ 1.21
CYP46A1Q9Y6A2 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC22.6■■□□□ 1.21
CYP46A1Q9Y6A2 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CYP46A1Q9Y6A2 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CYP46A1Q9Y6A2 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
CYP46A1Q9Y6A2 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC22.59■■□□□ 1.21
CYP46A1Q9Y6A2 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
CYP46A1Q9Y6A2 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
CYP46A1Q9Y6A2 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CYP46A1Q9Y6A2 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
CYP46A1Q9Y6A2 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
CYP46A1Q9Y6A2 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CYP46A1Q9Y6A2 NIFKP9-201ENST00000419265 221 ntBASIC22.59■■□□□ 1.21
CYP46A1Q9Y6A2 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CYP46A1Q9Y6A2 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CYP46A1Q9Y6A2 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
CYP46A1Q9Y6A2 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC22.59■■□□□ 1.21
CYP46A1Q9Y6A2 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
CYP46A1Q9Y6A2 CABP2-204ENST00000636477 941 ntTSL 5 BASIC22.59■■□□□ 1.21
CYP46A1Q9Y6A2 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CYP46A1Q9Y6A2 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
CYP46A1Q9Y6A2 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CYP46A1Q9Y6A2 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC22.59■■□□□ 1.21
CYP46A1Q9Y6A2 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CYP46A1Q9Y6A2 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CYP46A1Q9Y6A2 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC22.59■■□□□ 1.21
CYP46A1Q9Y6A2 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
CYP46A1Q9Y6A2 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
CYP46A1Q9Y6A2 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC22.58■■□□□ 1.21
CYP46A1Q9Y6A2 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC22.58■■□□□ 1.21
CYP46A1Q9Y6A2 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC22.58■■□□□ 1.21
CYP46A1Q9Y6A2 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CYP46A1Q9Y6A2 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
CYP46A1Q9Y6A2 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC22.58■■□□□ 1.21
CYP46A1Q9Y6A2 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CYP46A1Q9Y6A2 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CYP46A1Q9Y6A2 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CYP46A1Q9Y6A2 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
CYP46A1Q9Y6A2 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CYP46A1Q9Y6A2 GLRB-205ENST00000512619 728 ntTSL 3 BASIC22.58■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms