Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 NUDT16P1-203ENST00000513809 620 ntBASIC18.81■□□□□ 0.6
PCDHGA4Q9Y5G9 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.81■□□□□ 0.6
PCDHGA4Q9Y5G9 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.81■□□□□ 0.6
PCDHGA4Q9Y5G9 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.81■□□□□ 0.6
PCDHGA4Q9Y5G9 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDHGA4Q9Y5G9 AP000525.1-201ENST00000608286 694 ntBASIC18.81■□□□□ 0.6
PCDHGA4Q9Y5G9 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.81■□□□□ 0.6
PCDHGA4Q9Y5G9 PAX6-247ENST00000638965 979 ntTSL 5 BASIC18.81■□□□□ 0.6
PCDHGA4Q9Y5G9 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PCDHGA4Q9Y5G9 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGA4Q9Y5G9 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PCDHGA4Q9Y5G9 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGA4Q9Y5G9 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGA4Q9Y5G9 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
PCDHGA4Q9Y5G9 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGA4Q9Y5G9 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGA4Q9Y5G9 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA4Q9Y5G9 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA4Q9Y5G9 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA4Q9Y5G9 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA4Q9Y5G9 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA4Q9Y5G9 AC079598.2-202ENST00000546624 1451 ntBASIC18.8■□□□□ 0.6
PCDHGA4Q9Y5G9 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA4Q9Y5G9 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA4Q9Y5G9 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA4Q9Y5G9 UNC93B2-201ENST00000285383 730 ntBASIC18.8■□□□□ 0.6
PCDHGA4Q9Y5G9 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.8■□□□□ 0.6
PCDHGA4Q9Y5G9 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA4Q9Y5G9 YBX1P10-201ENST00000444752 975 ntBASIC18.8■□□□□ 0.6
PCDHGA4Q9Y5G9 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHGA4Q9Y5G9 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.8■□□□□ 0.6
PCDHGA4Q9Y5G9 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHGA4Q9Y5G9 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA4Q9Y5G9 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
PCDHGA4Q9Y5G9 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA4Q9Y5G9 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.8■□□□□ 0.6
PCDHGA4Q9Y5G9 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHGA4Q9Y5G9 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.8■□□□□ 0.6
PCDHGA4Q9Y5G9 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.8■□□□□ 0.6
PCDHGA4Q9Y5G9 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA4Q9Y5G9 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA4Q9Y5G9 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA4Q9Y5G9 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA4Q9Y5G9 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA4Q9Y5G9 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
PCDHGA4Q9Y5G9 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA4Q9Y5G9 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA4Q9Y5G9 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.79■□□□□ 0.6
PCDHGA4Q9Y5G9 AC113347.1-201ENST00000413321 391 ntBASIC18.79■□□□□ 0.6
PCDHGA4Q9Y5G9 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHGA4Q9Y5G9 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHGA4Q9Y5G9 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA4Q9Y5G9 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.79■□□□□ 0.6
PCDHGA4Q9Y5G9 REXO1L10P-201ENST00000615707 1290 ntBASIC18.79■□□□□ 0.6
PCDHGA4Q9Y5G9 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA4Q9Y5G9 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA4Q9Y5G9 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
PCDHGA4Q9Y5G9 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
PCDHGA4Q9Y5G9 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.79■□□□□ 0.6
PCDHGA4Q9Y5G9 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHGA4Q9Y5G9 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA4Q9Y5G9 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHGA4Q9Y5G9 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA4Q9Y5G9 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
PCDHGA4Q9Y5G9 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA4Q9Y5G9 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PCDHGA4Q9Y5G9 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
PCDHGA4Q9Y5G9 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDHGA4Q9Y5G9 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
PCDHGA4Q9Y5G9 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA4Q9Y5G9 MIR1238-201ENST00000408483 83 ntBASIC18.78■□□□□ 0.6
PCDHGA4Q9Y5G9 KRT18P57-201ENST00000443599 1254 ntBASIC18.78■□□□□ 0.6
PCDHGA4Q9Y5G9 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHGA4Q9Y5G9 AP002982.1-201ENST00000492365 877 ntBASIC18.78■□□□□ 0.6
PCDHGA4Q9Y5G9 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDHGA4Q9Y5G9 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PCDHGA4Q9Y5G9 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.78■□□□□ 0.6
PCDHGA4Q9Y5G9 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA4Q9Y5G9 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA4Q9Y5G9 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PCDHGA4Q9Y5G9 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PCDHGA4Q9Y5G9 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA4Q9Y5G9 NEFHP1-201ENST00000412845 2629 ntBASIC18.78■□□□□ 0.6
PCDHGA4Q9Y5G9 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA4Q9Y5G9 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA4Q9Y5G9 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA4Q9Y5G9 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHGA4Q9Y5G9 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
PCDHGA4Q9Y5G9 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA4Q9Y5G9 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA4Q9Y5G9 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA4Q9Y5G9 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA4Q9Y5G9 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA4Q9Y5G9 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA4Q9Y5G9 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA4Q9Y5G9 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
PCDHGA4Q9Y5G9 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA4Q9Y5G9 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA4Q9Y5G9 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA4Q9Y5G9 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms