Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 AC005332.8-201ENST00000622750 2735 ntBASIC17.95■□□□□ 0.46
RNF6Q9Y252 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
RNF6Q9Y252 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF6Q9Y252 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
RNF6Q9Y252 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF6Q9Y252 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF6Q9Y252 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.95■□□□□ 0.46
RNF6Q9Y252 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.95■□□□□ 0.46
RNF6Q9Y252 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RNF6Q9Y252 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RNF6Q9Y252 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF6Q9Y252 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF6Q9Y252 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RNF6Q9Y252 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RNF6Q9Y252 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF6Q9Y252 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.95■□□□□ 0.46
RNF6Q9Y252 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RNF6Q9Y252 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.95■□□□□ 0.46
RNF6Q9Y252 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.95■□□□□ 0.46
RNF6Q9Y252 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.95■□□□□ 0.46
RNF6Q9Y252 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RNF6Q9Y252 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF6Q9Y252 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF6Q9Y252 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF6Q9Y252 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF6Q9Y252 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RNF6Q9Y252 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.95■□□□□ 0.46
RNF6Q9Y252 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF6Q9Y252 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RNF6Q9Y252 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.95■□□□□ 0.46
RNF6Q9Y252 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
RNF6Q9Y252 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
RNF6Q9Y252 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF6Q9Y252 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF6Q9Y252 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF6Q9Y252 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RNF6Q9Y252 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.94■□□□□ 0.46
RNF6Q9Y252 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RNF6Q9Y252 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RNF6Q9Y252 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF6Q9Y252 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF6Q9Y252 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
RNF6Q9Y252 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF6Q9Y252 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF6Q9Y252 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF6Q9Y252 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RNF6Q9Y252 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF6Q9Y252 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.94■□□□□ 0.46
RNF6Q9Y252 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
RNF6Q9Y252 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RNF6Q9Y252 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.94■□□□□ 0.46
RNF6Q9Y252 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF6Q9Y252 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF6Q9Y252 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF6Q9Y252 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RNF6Q9Y252 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF6Q9Y252 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
RNF6Q9Y252 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
RNF6Q9Y252 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
RNF6Q9Y252 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF6Q9Y252 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF6Q9Y252 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF6Q9Y252 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.93■□□□□ 0.46
RNF6Q9Y252 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF6Q9Y252 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF6Q9Y252 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF6Q9Y252 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF6Q9Y252 AP001271.2-201ENST00000624018 1556 ntBASIC17.93■□□□□ 0.46
RNF6Q9Y252 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF6Q9Y252 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF6Q9Y252 KRT8P17-201ENST00000453110 1448 ntBASIC17.93■□□□□ 0.46
RNF6Q9Y252 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.93■□□□□ 0.46
RNF6Q9Y252 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.93■□□□□ 0.46
RNF6Q9Y252 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
RNF6Q9Y252 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RNF6Q9Y252 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
RNF6Q9Y252 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RNF6Q9Y252 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.93■□□□□ 0.46
RNF6Q9Y252 FAM210CP-201ENST00000445714 574 ntBASIC17.93■□□□□ 0.46
RNF6Q9Y252 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RNF6Q9Y252 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.93■□□□□ 0.46
RNF6Q9Y252 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF6Q9Y252 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.93■□□□□ 0.46
RNF6Q9Y252 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.93■□□□□ 0.46
RNF6Q9Y252 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.93■□□□□ 0.46
RNF6Q9Y252 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.93■□□□□ 0.46
RNF6Q9Y252 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.93■□□□□ 0.46
RNF6Q9Y252 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF6Q9Y252 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF6Q9Y252 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
RNF6Q9Y252 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.93■□□□□ 0.46
RNF6Q9Y252 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
RNF6Q9Y252 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF6Q9Y252 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
RNF6Q9Y252 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF6Q9Y252 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF6Q9Y252 AC104581.1-202ENST00000635932 2618 ntBASIC17.92■□□□□ 0.46
RNF6Q9Y252 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.92■□□□□ 0.46
RNF6Q9Y252 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF6Q9Y252 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms