Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
AP4E1Q9UPM8 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.8■□□□□ 0.76
AP4E1Q9UPM8 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
AP4E1Q9UPM8 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
AP4E1Q9UPM8 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
AP4E1Q9UPM8 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
AP4E1Q9UPM8 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.8■□□□□ 0.76
AP4E1Q9UPM8 KRT8P11-201ENST00000409686 1436 ntBASIC19.8■□□□□ 0.76
AP4E1Q9UPM8 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.8■□□□□ 0.76
AP4E1Q9UPM8 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
AP4E1Q9UPM8 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.8■□□□□ 0.76
AP4E1Q9UPM8 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.8■□□□□ 0.76
AP4E1Q9UPM8 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.8■□□□□ 0.76
AP4E1Q9UPM8 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
AP4E1Q9UPM8 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.8■□□□□ 0.76
AP4E1Q9UPM8 Z99916.2-201ENST00000604037 246 ntBASIC19.8■□□□□ 0.76
AP4E1Q9UPM8 AP001412.1-201ENST00000608405 714 ntBASIC19.8■□□□□ 0.76
AP4E1Q9UPM8 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.8■□□□□ 0.76
AP4E1Q9UPM8 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
AP4E1Q9UPM8 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
AP4E1Q9UPM8 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
AP4E1Q9UPM8 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
AP4E1Q9UPM8 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
AP4E1Q9UPM8 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
AP4E1Q9UPM8 TNXA-203ENST00000507684 2038 ntBASIC19.8■□□□□ 0.76
AP4E1Q9UPM8 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
AP4E1Q9UPM8 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
AP4E1Q9UPM8 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP4E1Q9UPM8 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP4E1Q9UPM8 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP4E1Q9UPM8 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP4E1Q9UPM8 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP4E1Q9UPM8 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
AP4E1Q9UPM8 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP4E1Q9UPM8 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP4E1Q9UPM8 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP4E1Q9UPM8 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP4E1Q9UPM8 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.79■□□□□ 0.76
AP4E1Q9UPM8 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
AP4E1Q9UPM8 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
AP4E1Q9UPM8 B3GAT3P1-201ENST00000471720 806 ntBASIC19.79■□□□□ 0.76
AP4E1Q9UPM8 AC011506.1-201ENST00000474329 610 ntBASIC19.79■□□□□ 0.76
AP4E1Q9UPM8 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
AP4E1Q9UPM8 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
AP4E1Q9UPM8 AC008550.1-201ENST00000511500 884 ntBASIC19.79■□□□□ 0.76
AP4E1Q9UPM8 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.79■□□□□ 0.76
AP4E1Q9UPM8 MIR6786-201ENST00000616843 113 ntBASIC19.79■□□□□ 0.76
AP4E1Q9UPM8 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
AP4E1Q9UPM8 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP4E1Q9UPM8 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP4E1Q9UPM8 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP4E1Q9UPM8 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP4E1Q9UPM8 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
AP4E1Q9UPM8 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP4E1Q9UPM8 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.79■□□□□ 0.76
AP4E1Q9UPM8 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.79■□□□□ 0.76
AP4E1Q9UPM8 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP4E1Q9UPM8 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
AP4E1Q9UPM8 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
AP4E1Q9UPM8 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP4E1Q9UPM8 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
AP4E1Q9UPM8 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP4E1Q9UPM8 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP4E1Q9UPM8 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP4E1Q9UPM8 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.78■□□□□ 0.76
AP4E1Q9UPM8 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP4E1Q9UPM8 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
AP4E1Q9UPM8 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
AP4E1Q9UPM8 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
AP4E1Q9UPM8 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP4E1Q9UPM8 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP4E1Q9UPM8 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.78■□□□□ 0.76
AP4E1Q9UPM8 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP4E1Q9UPM8 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
AP4E1Q9UPM8 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.78■□□□□ 0.76
AP4E1Q9UPM8 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
AP4E1Q9UPM8 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP4E1Q9UPM8 AC008040.2-201ENST00000461049 708 ntBASIC19.78■□□□□ 0.76
AP4E1Q9UPM8 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.78■□□□□ 0.76
AP4E1Q9UPM8 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.78■□□□□ 0.76
AP4E1Q9UPM8 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.78■□□□□ 0.76
AP4E1Q9UPM8 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP4E1Q9UPM8 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP4E1Q9UPM8 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP4E1Q9UPM8 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.78■□□□□ 0.76
AP4E1Q9UPM8 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.77■□□□□ 0.76
AP4E1Q9UPM8 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
AP4E1Q9UPM8 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
AP4E1Q9UPM8 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.77■□□□□ 0.76
AP4E1Q9UPM8 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
AP4E1Q9UPM8 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
AP4E1Q9UPM8 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
AP4E1Q9UPM8 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.77■□□□□ 0.76
AP4E1Q9UPM8 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
AP4E1Q9UPM8 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
AP4E1Q9UPM8 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.77■□□□□ 0.76
AP4E1Q9UPM8 MESTP1-201ENST00000404287 994 ntBASIC19.77■□□□□ 0.76
AP4E1Q9UPM8 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
AP4E1Q9UPM8 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.77■□□□□ 0.76
AP4E1Q9UPM8 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms