Protein–RNA interactions for Protein: Q9UNE2

RPH3AL, Rab effector Noc2, humanhuman

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3ALQ9UNE2 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RPH3ALQ9UNE2 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPH3ALQ9UNE2 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC14.87□□□□□ -0.03
RPH3ALQ9UNE2 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPH3ALQ9UNE2 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPH3ALQ9UNE2 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
RPH3ALQ9UNE2 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC14.87□□□□□ -0.03
RPH3ALQ9UNE2 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
RPH3ALQ9UNE2 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RPH3ALQ9UNE2 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC14.87□□□□□ -0.03
RPH3ALQ9UNE2 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
RPH3ALQ9UNE2 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPH3ALQ9UNE2 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPH3ALQ9UNE2 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPH3ALQ9UNE2 MCRIP2P1-201ENST00000394346 511 ntBASIC14.87□□□□□ -0.03
RPH3ALQ9UNE2 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPH3ALQ9UNE2 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPH3ALQ9UNE2 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RPH3ALQ9UNE2 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC14.87□□□□□ -0.03
RPH3ALQ9UNE2 MFSD11-216ENST00000590393 1141 ntBASIC14.87□□□□□ -0.03
RPH3ALQ9UNE2 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC14.87□□□□□ -0.03
RPH3ALQ9UNE2 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RPH3ALQ9UNE2 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC14.87□□□□□ -0.03
RPH3ALQ9UNE2 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPH3ALQ9UNE2 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
RPH3ALQ9UNE2 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPH3ALQ9UNE2 CROCCP3-202ENST00000420820 1947 ntBASIC14.87□□□□□ -0.03
RPH3ALQ9UNE2 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC14.87□□□□□ -0.03
RPH3ALQ9UNE2 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPH3ALQ9UNE2 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPH3ALQ9UNE2 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.87□□□□□ -0.03
RPH3ALQ9UNE2 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPH3ALQ9UNE2 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RPH3ALQ9UNE2 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RPH3ALQ9UNE2 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPH3ALQ9UNE2 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC14.87□□□□□ -0.03
RPH3ALQ9UNE2 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
RPH3ALQ9UNE2 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPH3ALQ9UNE2 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RPH3ALQ9UNE2 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC14.87□□□□□ -0.03
RPH3ALQ9UNE2 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPH3ALQ9UNE2 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
RPH3ALQ9UNE2 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RPH3ALQ9UNE2 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPH3ALQ9UNE2 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPH3ALQ9UNE2 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPH3ALQ9UNE2 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPH3ALQ9UNE2 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPH3ALQ9UNE2 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC14.86□□□□□ -0.03
RPH3ALQ9UNE2 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC14.86□□□□□ -0.03
RPH3ALQ9UNE2 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC14.86□□□□□ -0.03
RPH3ALQ9UNE2 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPH3ALQ9UNE2 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPH3ALQ9UNE2 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPH3ALQ9UNE2 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RPH3ALQ9UNE2 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPH3ALQ9UNE2 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPH3ALQ9UNE2 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC14.86□□□□□ -0.03
RPH3ALQ9UNE2 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPH3ALQ9UNE2 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPH3ALQ9UNE2 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RPH3ALQ9UNE2 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RPH3ALQ9UNE2 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPH3ALQ9UNE2 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC14.86□□□□□ -0.03
RPH3ALQ9UNE2 AC105020.6-201ENST00000621523 1217 ntBASIC14.86□□□□□ -0.03
RPH3ALQ9UNE2 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RPH3ALQ9UNE2 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPH3ALQ9UNE2 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPH3ALQ9UNE2 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
RPH3ALQ9UNE2 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPH3ALQ9UNE2 USP49-202ENST00000373010 2446 ntTSL 5 BASIC14.86□□□□□ -0.03
RPH3ALQ9UNE2 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
RPH3ALQ9UNE2 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC14.86□□□□□ -0.03
RPH3ALQ9UNE2 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
RPH3ALQ9UNE2 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPH3ALQ9UNE2 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC14.86□□□□□ -0.03
RPH3ALQ9UNE2 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.86□□□□□ -0.03
RPH3ALQ9UNE2 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RPH3ALQ9UNE2 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RPH3ALQ9UNE2 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPH3ALQ9UNE2 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPH3ALQ9UNE2 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPH3ALQ9UNE2 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPH3ALQ9UNE2 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RPH3ALQ9UNE2 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC14.85□□□□□ -0.03
RPH3ALQ9UNE2 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPH3ALQ9UNE2 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RPH3ALQ9UNE2 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPH3ALQ9UNE2 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPH3ALQ9UNE2 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
RPH3ALQ9UNE2 AC009113.1-201ENST00000570267 2443 ntBASIC14.85□□□□□ -0.03
RPH3ALQ9UNE2 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RPH3ALQ9UNE2 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPH3ALQ9UNE2 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPH3ALQ9UNE2 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
RPH3ALQ9UNE2 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
RPH3ALQ9UNE2 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RPH3ALQ9UNE2 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.85□□□□□ -0.03
RPH3ALQ9UNE2 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPH3ALQ9UNE2 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms