Protein–RNA interactions for Protein: Q9UH90

FBXO40, F-box only protein 40, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO40Q9UH90 GPAT2P1-201ENST00000444924 1672 ntBASIC21.69■■□□□ 1.06
FBXO40Q9UH90 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC21.69■■□□□ 1.06
FBXO40Q9UH90 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
FBXO40Q9UH90 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
FBXO40Q9UH90 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
FBXO40Q9UH90 LINC01521-201ENST00000504184 1943 ntBASIC21.68■■□□□ 1.06
FBXO40Q9UH90 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
FBXO40Q9UH90 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
FBXO40Q9UH90 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
FBXO40Q9UH90 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.68■■□□□ 1.06
FBXO40Q9UH90 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.68■■□□□ 1.06
FBXO40Q9UH90 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
FBXO40Q9UH90 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
FBXO40Q9UH90 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC21.68■■□□□ 1.06
FBXO40Q9UH90 AC034232.1-201ENST00000506026 1064 ntBASIC21.68■■□□□ 1.06
FBXO40Q9UH90 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC21.68■■□□□ 1.06
FBXO40Q9UH90 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC21.68■■□□□ 1.06
FBXO40Q9UH90 AC083849.1-201ENST00000615227 514 ntBASIC21.68■■□□□ 1.06
FBXO40Q9UH90 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
FBXO40Q9UH90 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC21.68■■□□□ 1.06
FBXO40Q9UH90 LINC01311-201ENST00000565162 1445 ntBASIC21.68■■□□□ 1.06
FBXO40Q9UH90 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21.68■■□□□ 1.06
FBXO40Q9UH90 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
FBXO40Q9UH90 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.68■■□□□ 1.06
FBXO40Q9UH90 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC21.68■■□□□ 1.06
FBXO40Q9UH90 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
FBXO40Q9UH90 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
FBXO40Q9UH90 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
FBXO40Q9UH90 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
FBXO40Q9UH90 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
FBXO40Q9UH90 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
FBXO40Q9UH90 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.68■■□□□ 1.06
FBXO40Q9UH90 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
FBXO40Q9UH90 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.67■■□□□ 1.06
FBXO40Q9UH90 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
FBXO40Q9UH90 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21.67■■□□□ 1.06
FBXO40Q9UH90 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.67■■□□□ 1.06
FBXO40Q9UH90 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
FBXO40Q9UH90 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
FBXO40Q9UH90 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC21.67■■□□□ 1.06
FBXO40Q9UH90 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
FBXO40Q9UH90 KRT8P3-201ENST00000519669 1449 ntBASIC21.67■■□□□ 1.06
FBXO40Q9UH90 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
FBXO40Q9UH90 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
FBXO40Q9UH90 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
FBXO40Q9UH90 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
FBXO40Q9UH90 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
FBXO40Q9UH90 AL023284.2-201ENST00000405850 579 ntBASIC21.67■■□□□ 1.06
FBXO40Q9UH90 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
FBXO40Q9UH90 SPDYE15P-201ENST00000424157 909 ntBASIC21.67■■□□□ 1.06
FBXO40Q9UH90 PTK2-216ENST00000519881 863 ntTSL 3 BASIC21.67■■□□□ 1.06
FBXO40Q9UH90 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
FBXO40Q9UH90 FGF14-AS2-201ENST00000606448 1074 ntBASIC21.67■■□□□ 1.06
FBXO40Q9UH90 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC21.67■■□□□ 1.06
FBXO40Q9UH90 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
FBXO40Q9UH90 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.67■■□□□ 1.06
FBXO40Q9UH90 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
FBXO40Q9UH90 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.67■■□□□ 1.06
FBXO40Q9UH90 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
FBXO40Q9UH90 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21.67■■□□□ 1.06
FBXO40Q9UH90 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.66■■□□□ 1.06
FBXO40Q9UH90 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
FBXO40Q9UH90 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.66■■□□□ 1.06
FBXO40Q9UH90 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
FBXO40Q9UH90 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
FBXO40Q9UH90 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.66■■□□□ 1.06
FBXO40Q9UH90 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
FBXO40Q9UH90 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
FBXO40Q9UH90 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
FBXO40Q9UH90 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
FBXO40Q9UH90 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
FBXO40Q9UH90 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC21.66■■□□□ 1.06
FBXO40Q9UH90 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
FBXO40Q9UH90 KRT18P56-201ENST00000507275 550 ntBASIC21.66■■□□□ 1.06
FBXO40Q9UH90 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
FBXO40Q9UH90 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC21.66■■□□□ 1.06
FBXO40Q9UH90 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC21.66■■□□□ 1.06
FBXO40Q9UH90 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
FBXO40Q9UH90 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
FBXO40Q9UH90 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
FBXO40Q9UH90 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
FBXO40Q9UH90 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
FBXO40Q9UH90 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
FBXO40Q9UH90 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
FBXO40Q9UH90 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC21.66■■□□□ 1.06
FBXO40Q9UH90 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC21.66■■□□□ 1.06
FBXO40Q9UH90 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
FBXO40Q9UH90 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
FBXO40Q9UH90 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
FBXO40Q9UH90 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.65■■□□□ 1.06
FBXO40Q9UH90 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.65■■□□□ 1.06
FBXO40Q9UH90 AC112907.3-201ENST00000577781 2400 ntBASIC21.65■■□□□ 1.06
FBXO40Q9UH90 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC21.65■■□□□ 1.06
FBXO40Q9UH90 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
FBXO40Q9UH90 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
FBXO40Q9UH90 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC21.65■■□□□ 1.06
FBXO40Q9UH90 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
FBXO40Q9UH90 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
FBXO40Q9UH90 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC21.65■■□□□ 1.06
FBXO40Q9UH90 MCCD1P1-208ENST00000445732 328 ntBASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms