Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC16.79■□□□□ 0.28
COMMD3Q9UBI1 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COMMD3Q9UBI1 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
COMMD3Q9UBI1 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.79■□□□□ 0.28
COMMD3Q9UBI1 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COMMD3Q9UBI1 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
COMMD3Q9UBI1 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
COMMD3Q9UBI1 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
COMMD3Q9UBI1 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC16.79■□□□□ 0.28
COMMD3Q9UBI1 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COMMD3Q9UBI1 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COMMD3Q9UBI1 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
COMMD3Q9UBI1 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.79■□□□□ 0.28
COMMD3Q9UBI1 ANO7L1-203ENST00000602586 1720 ntBASIC16.79■□□□□ 0.28
COMMD3Q9UBI1 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
COMMD3Q9UBI1 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.78■□□□□ 0.28
COMMD3Q9UBI1 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
COMMD3Q9UBI1 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.78■□□□□ 0.28
COMMD3Q9UBI1 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
COMMD3Q9UBI1 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.78■□□□□ 0.28
COMMD3Q9UBI1 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.78■□□□□ 0.28
COMMD3Q9UBI1 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
COMMD3Q9UBI1 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COMMD3Q9UBI1 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
COMMD3Q9UBI1 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.78■□□□□ 0.28
COMMD3Q9UBI1 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
COMMD3Q9UBI1 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
COMMD3Q9UBI1 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
COMMD3Q9UBI1 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
COMMD3Q9UBI1 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC16.78■□□□□ 0.28
COMMD3Q9UBI1 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
COMMD3Q9UBI1 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC16.78■□□□□ 0.28
COMMD3Q9UBI1 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC16.78■□□□□ 0.28
COMMD3Q9UBI1 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
COMMD3Q9UBI1 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC16.78■□□□□ 0.28
COMMD3Q9UBI1 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
COMMD3Q9UBI1 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
COMMD3Q9UBI1 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.78■□□□□ 0.28
COMMD3Q9UBI1 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
COMMD3Q9UBI1 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COMMD3Q9UBI1 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
COMMD3Q9UBI1 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
COMMD3Q9UBI1 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.78■□□□□ 0.28
COMMD3Q9UBI1 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
COMMD3Q9UBI1 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COMMD3Q9UBI1 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COMMD3Q9UBI1 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.77■□□□□ 0.28
COMMD3Q9UBI1 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.77■□□□□ 0.28
COMMD3Q9UBI1 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.77■□□□□ 0.28
COMMD3Q9UBI1 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
COMMD3Q9UBI1 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
COMMD3Q9UBI1 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
COMMD3Q9UBI1 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.77■□□□□ 0.28
COMMD3Q9UBI1 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
COMMD3Q9UBI1 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
COMMD3Q9UBI1 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.77■□□□□ 0.28
COMMD3Q9UBI1 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
COMMD3Q9UBI1 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
COMMD3Q9UBI1 PBX2P1-201ENST00000493219 1291 ntBASIC16.77■□□□□ 0.28
COMMD3Q9UBI1 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC16.77■□□□□ 0.28
COMMD3Q9UBI1 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
COMMD3Q9UBI1 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
COMMD3Q9UBI1 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
COMMD3Q9UBI1 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
COMMD3Q9UBI1 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
COMMD3Q9UBI1 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
COMMD3Q9UBI1 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.77■□□□□ 0.27
COMMD3Q9UBI1 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
COMMD3Q9UBI1 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
COMMD3Q9UBI1 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.27
COMMD3Q9UBI1 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.77■□□□□ 0.27
COMMD3Q9UBI1 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
COMMD3Q9UBI1 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
COMMD3Q9UBI1 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COMMD3Q9UBI1 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
COMMD3Q9UBI1 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COMMD3Q9UBI1 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.76■□□□□ 0.27
COMMD3Q9UBI1 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
COMMD3Q9UBI1 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.76■□□□□ 0.27
COMMD3Q9UBI1 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.76■□□□□ 0.27
COMMD3Q9UBI1 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
COMMD3Q9UBI1 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
COMMD3Q9UBI1 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
COMMD3Q9UBI1 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC16.76■□□□□ 0.27
COMMD3Q9UBI1 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC16.76■□□□□ 0.27
COMMD3Q9UBI1 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC16.76■□□□□ 0.27
COMMD3Q9UBI1 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
COMMD3Q9UBI1 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COMMD3Q9UBI1 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
COMMD3Q9UBI1 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
COMMD3Q9UBI1 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
COMMD3Q9UBI1 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
COMMD3Q9UBI1 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
COMMD3Q9UBI1 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.76■□□□□ 0.27
COMMD3Q9UBI1 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COMMD3Q9UBI1 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COMMD3Q9UBI1 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COMMD3Q9UBI1 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
COMMD3Q9UBI1 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COMMD3Q9UBI1 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms