Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LRIT1Q9P2V4 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.45■□□□□ 0.54
LRIT1Q9P2V4 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRIT1Q9P2V4 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.45■□□□□ 0.54
LRIT1Q9P2V4 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.45■□□□□ 0.54
LRIT1Q9P2V4 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRIT1Q9P2V4 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRIT1Q9P2V4 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.45■□□□□ 0.54
LRIT1Q9P2V4 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LRIT1Q9P2V4 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRIT1Q9P2V4 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.44■□□□□ 0.54
LRIT1Q9P2V4 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRIT1Q9P2V4 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
LRIT1Q9P2V4 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
LRIT1Q9P2V4 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LRIT1Q9P2V4 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LRIT1Q9P2V4 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
LRIT1Q9P2V4 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.44■□□□□ 0.54
LRIT1Q9P2V4 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRIT1Q9P2V4 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRIT1Q9P2V4 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
LRIT1Q9P2V4 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRIT1Q9P2V4 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRIT1Q9P2V4 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.44■□□□□ 0.54
LRIT1Q9P2V4 AC009947.2-201ENST00000444014 672 ntBASIC18.44■□□□□ 0.54
LRIT1Q9P2V4 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.44■□□□□ 0.54
LRIT1Q9P2V4 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.44■□□□□ 0.54
LRIT1Q9P2V4 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.44■□□□□ 0.54
LRIT1Q9P2V4 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRIT1Q9P2V4 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.44■□□□□ 0.54
LRIT1Q9P2V4 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
LRIT1Q9P2V4 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LRIT1Q9P2V4 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LRIT1Q9P2V4 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.44■□□□□ 0.54
LRIT1Q9P2V4 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.44■□□□□ 0.54
LRIT1Q9P2V4 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
LRIT1Q9P2V4 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRIT1Q9P2V4 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRIT1Q9P2V4 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRIT1Q9P2V4 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.44■□□□□ 0.54
LRIT1Q9P2V4 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRIT1Q9P2V4 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
LRIT1Q9P2V4 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.44■□□□□ 0.54
LRIT1Q9P2V4 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.44■□□□□ 0.54
LRIT1Q9P2V4 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.44■□□□□ 0.54
LRIT1Q9P2V4 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.44■□□□□ 0.54
LRIT1Q9P2V4 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
LRIT1Q9P2V4 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRIT1Q9P2V4 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.43■□□□□ 0.54
LRIT1Q9P2V4 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.43■□□□□ 0.54
LRIT1Q9P2V4 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRIT1Q9P2V4 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
LRIT1Q9P2V4 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRIT1Q9P2V4 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRIT1Q9P2V4 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRIT1Q9P2V4 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.43■□□□□ 0.54
LRIT1Q9P2V4 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRIT1Q9P2V4 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LRIT1Q9P2V4 UPK3BP1-201ENST00000428678 509 ntBASIC18.43■□□□□ 0.54
LRIT1Q9P2V4 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.43■□□□□ 0.54
LRIT1Q9P2V4 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.43■□□□□ 0.54
LRIT1Q9P2V4 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.43■□□□□ 0.54
LRIT1Q9P2V4 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.43■□□□□ 0.54
LRIT1Q9P2V4 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.43■□□□□ 0.54
LRIT1Q9P2V4 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRIT1Q9P2V4 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRIT1Q9P2V4 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRIT1Q9P2V4 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.43■□□□□ 0.54
LRIT1Q9P2V4 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.43■□□□□ 0.54
LRIT1Q9P2V4 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRIT1Q9P2V4 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRIT1Q9P2V4 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.43■□□□□ 0.54
LRIT1Q9P2V4 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRIT1Q9P2V4 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRIT1Q9P2V4 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LRIT1Q9P2V4 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
LRIT1Q9P2V4 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LRIT1Q9P2V4 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRIT1Q9P2V4 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.42■□□□□ 0.54
LRIT1Q9P2V4 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.42■□□□□ 0.54
LRIT1Q9P2V4 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.42■□□□□ 0.54
LRIT1Q9P2V4 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.42■□□□□ 0.54
LRIT1Q9P2V4 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.42■□□□□ 0.54
LRIT1Q9P2V4 NEK4P2-201ENST00000580004 1012 ntBASIC18.42■□□□□ 0.54
LRIT1Q9P2V4 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRIT1Q9P2V4 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.42■□□□□ 0.54
LRIT1Q9P2V4 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.42■□□□□ 0.54
LRIT1Q9P2V4 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRIT1Q9P2V4 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
LRIT1Q9P2V4 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
LRIT1Q9P2V4 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.42■□□□□ 0.54
LRIT1Q9P2V4 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
LRIT1Q9P2V4 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.42■□□□□ 0.54
LRIT1Q9P2V4 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
LRIT1Q9P2V4 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.42■□□□□ 0.54
LRIT1Q9P2V4 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRIT1Q9P2V4 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRIT1Q9P2V4 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRIT1Q9P2V4 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRIT1Q9P2V4 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms