Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LIN7CQ9NUP9 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LIN7CQ9NUP9 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LIN7CQ9NUP9 AL049812.1-201ENST00000432563 2267 ntBASIC15.85■□□□□ 0.13
LIN7CQ9NUP9 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LIN7CQ9NUP9 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LIN7CQ9NUP9 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
LIN7CQ9NUP9 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LIN7CQ9NUP9 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC15.85■□□□□ 0.13
LIN7CQ9NUP9 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LIN7CQ9NUP9 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LIN7CQ9NUP9 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LIN7CQ9NUP9 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LIN7CQ9NUP9 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
LIN7CQ9NUP9 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC15.85■□□□□ 0.13
LIN7CQ9NUP9 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LIN7CQ9NUP9 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC15.85■□□□□ 0.13
LIN7CQ9NUP9 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LIN7CQ9NUP9 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LIN7CQ9NUP9 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LIN7CQ9NUP9 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC15.85■□□□□ 0.13
LIN7CQ9NUP9 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC15.85■□□□□ 0.13
LIN7CQ9NUP9 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
LIN7CQ9NUP9 ESRRAP1-201ENST00000400596 1257 ntBASIC15.85■□□□□ 0.13
LIN7CQ9NUP9 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LIN7CQ9NUP9 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC15.85■□□□□ 0.13
LIN7CQ9NUP9 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC15.85■□□□□ 0.13
LIN7CQ9NUP9 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC15.85■□□□□ 0.13
LIN7CQ9NUP9 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC15.85■□□□□ 0.13
LIN7CQ9NUP9 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LIN7CQ9NUP9 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LIN7CQ9NUP9 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC15.85■□□□□ 0.13
LIN7CQ9NUP9 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
LIN7CQ9NUP9 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LIN7CQ9NUP9 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LIN7CQ9NUP9 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LIN7CQ9NUP9 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LIN7CQ9NUP9 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC15.85■□□□□ 0.13
LIN7CQ9NUP9 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LIN7CQ9NUP9 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LIN7CQ9NUP9 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LIN7CQ9NUP9 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
LIN7CQ9NUP9 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LIN7CQ9NUP9 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC15.85■□□□□ 0.13
LIN7CQ9NUP9 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LIN7CQ9NUP9 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LIN7CQ9NUP9 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LIN7CQ9NUP9 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LIN7CQ9NUP9 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC15.84■□□□□ 0.13
LIN7CQ9NUP9 AC079598.2-202ENST00000546624 1451 ntBASIC15.84■□□□□ 0.13
LIN7CQ9NUP9 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC15.84■□□□□ 0.13
LIN7CQ9NUP9 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LIN7CQ9NUP9 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
LIN7CQ9NUP9 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC15.84■□□□□ 0.13
LIN7CQ9NUP9 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC15.84■□□□□ 0.13
LIN7CQ9NUP9 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LIN7CQ9NUP9 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LIN7CQ9NUP9 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
LIN7CQ9NUP9 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LIN7CQ9NUP9 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LIN7CQ9NUP9 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LIN7CQ9NUP9 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LIN7CQ9NUP9 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LIN7CQ9NUP9 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LIN7CQ9NUP9 POU5F1P3-201ENST00000428824 1078 ntBASIC15.84■□□□□ 0.13
LIN7CQ9NUP9 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC15.84■□□□□ 0.13
LIN7CQ9NUP9 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
LIN7CQ9NUP9 FAM201B-201ENST00000458407 597 ntBASIC15.84■□□□□ 0.13
LIN7CQ9NUP9 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC15.84■□□□□ 0.13
LIN7CQ9NUP9 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC15.84■□□□□ 0.13
LIN7CQ9NUP9 MMAB-206ENST00000540016 945 ntTSL 3 BASIC15.84■□□□□ 0.13
LIN7CQ9NUP9 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LIN7CQ9NUP9 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC15.84■□□□□ 0.13
LIN7CQ9NUP9 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LIN7CQ9NUP9 AC120498.8-201ENST00000614275 531 ntBASIC15.84■□□□□ 0.13
LIN7CQ9NUP9 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC15.84■□□□□ 0.13
LIN7CQ9NUP9 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
LIN7CQ9NUP9 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
LIN7CQ9NUP9 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC15.84■□□□□ 0.13
LIN7CQ9NUP9 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LIN7CQ9NUP9 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LIN7CQ9NUP9 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LIN7CQ9NUP9 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LIN7CQ9NUP9 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LIN7CQ9NUP9 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LIN7CQ9NUP9 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
LIN7CQ9NUP9 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
LIN7CQ9NUP9 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC15.83■□□□□ 0.13
LIN7CQ9NUP9 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
LIN7CQ9NUP9 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
LIN7CQ9NUP9 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
LIN7CQ9NUP9 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LIN7CQ9NUP9 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LIN7CQ9NUP9 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LIN7CQ9NUP9 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LIN7CQ9NUP9 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC15.83■□□□□ 0.12
LIN7CQ9NUP9 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LIN7CQ9NUP9 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LIN7CQ9NUP9 KRT17P3-201ENST00000420566 1262 ntBASIC15.83■□□□□ 0.12
LIN7CQ9NUP9 POM121L13P-201ENST00000422362 380 ntBASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms