Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
ECHDC1Q9NTX5 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
ECHDC1Q9NTX5 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC23.26■■□□□ 1.31
ECHDC1Q9NTX5 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
ECHDC1Q9NTX5 MFAP1P1-201ENST00000442257 1255 ntBASIC23.26■■□□□ 1.31
ECHDC1Q9NTX5 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC23.26■■□□□ 1.31
ECHDC1Q9NTX5 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
ECHDC1Q9NTX5 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC23.26■■□□□ 1.31
ECHDC1Q9NTX5 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
ECHDC1Q9NTX5 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC23.26■■□□□ 1.31
ECHDC1Q9NTX5 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC23.25■■□□□ 1.31
ECHDC1Q9NTX5 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
ECHDC1Q9NTX5 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
ECHDC1Q9NTX5 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ECHDC1Q9NTX5 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
ECHDC1Q9NTX5 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC23.25■■□□□ 1.31
ECHDC1Q9NTX5 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ECHDC1Q9NTX5 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ECHDC1Q9NTX5 CRYGFP-201ENST00000418459 633 ntBASIC23.25■■□□□ 1.31
ECHDC1Q9NTX5 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
ECHDC1Q9NTX5 AP005242.2-201ENST00000580065 1175 ntBASIC23.25■■□□□ 1.31
ECHDC1Q9NTX5 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ECHDC1Q9NTX5 GRAMD4P8-201ENST00000605465 1115 ntBASIC23.25■■□□□ 1.31
ECHDC1Q9NTX5 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
ECHDC1Q9NTX5 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ECHDC1Q9NTX5 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ECHDC1Q9NTX5 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
ECHDC1Q9NTX5 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ECHDC1Q9NTX5 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ECHDC1Q9NTX5 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC23.24■■□□□ 1.31
ECHDC1Q9NTX5 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ECHDC1Q9NTX5 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC23.24■■□□□ 1.31
ECHDC1Q9NTX5 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
ECHDC1Q9NTX5 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
ECHDC1Q9NTX5 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
ECHDC1Q9NTX5 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC23.24■■□□□ 1.31
ECHDC1Q9NTX5 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ECHDC1Q9NTX5 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
ECHDC1Q9NTX5 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
ECHDC1Q9NTX5 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
ECHDC1Q9NTX5 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
ECHDC1Q9NTX5 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ECHDC1Q9NTX5 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ECHDC1Q9NTX5 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
ECHDC1Q9NTX5 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC23.24■■□□□ 1.31
ECHDC1Q9NTX5 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
ECHDC1Q9NTX5 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC23.23■■□□□ 1.31
ECHDC1Q9NTX5 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
ECHDC1Q9NTX5 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ECHDC1Q9NTX5 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC23.23■■□□□ 1.31
ECHDC1Q9NTX5 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC23.23■■□□□ 1.31
ECHDC1Q9NTX5 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC23.23■■□□□ 1.31
ECHDC1Q9NTX5 FITM1-202ENST00000559294 800 ntBASIC23.23■■□□□ 1.31
ECHDC1Q9NTX5 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC23.23■■□□□ 1.31
ECHDC1Q9NTX5 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC23.23■■□□□ 1.31
ECHDC1Q9NTX5 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
ECHDC1Q9NTX5 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC23.23■■□□□ 1.31
ECHDC1Q9NTX5 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ECHDC1Q9NTX5 AC018445.3-201ENST00000624177 1945 ntBASIC23.23■■□□□ 1.31
ECHDC1Q9NTX5 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ECHDC1Q9NTX5 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC23.23■■□□□ 1.31
ECHDC1Q9NTX5 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
ECHDC1Q9NTX5 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC23.22■■□□□ 1.31
ECHDC1Q9NTX5 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
ECHDC1Q9NTX5 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ECHDC1Q9NTX5 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
ECHDC1Q9NTX5 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ECHDC1Q9NTX5 PRR31-201ENST00000371629 978 ntTSL 2 BASIC23.22■■□□□ 1.31
ECHDC1Q9NTX5 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
ECHDC1Q9NTX5 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC23.22■■□□□ 1.31
ECHDC1Q9NTX5 AL390955.1-201ENST00000428694 934 ntBASIC23.22■■□□□ 1.31
ECHDC1Q9NTX5 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
ECHDC1Q9NTX5 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
ECHDC1Q9NTX5 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
ECHDC1Q9NTX5 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
ECHDC1Q9NTX5 AP000974.1-201ENST00000623909 2387 ntBASIC23.22■■□□□ 1.31
ECHDC1Q9NTX5 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ECHDC1Q9NTX5 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC23.22■■□□□ 1.31
ECHDC1Q9NTX5 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ECHDC1Q9NTX5 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
ECHDC1Q9NTX5 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
ECHDC1Q9NTX5 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC23.22■■□□□ 1.31
ECHDC1Q9NTX5 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ECHDC1Q9NTX5 BX323043.1-201ENST00000641006 1765 ntBASIC23.22■■□□□ 1.31
ECHDC1Q9NTX5 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC23.22■■□□□ 1.31
ECHDC1Q9NTX5 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ECHDC1Q9NTX5 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC23.21■■□□□ 1.31
ECHDC1Q9NTX5 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
ECHDC1Q9NTX5 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ECHDC1Q9NTX5 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC23.21■■□□□ 1.31
ECHDC1Q9NTX5 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC23.21■■□□□ 1.31
ECHDC1Q9NTX5 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC23.21■■□□□ 1.31
ECHDC1Q9NTX5 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC23.21■■□□□ 1.31
ECHDC1Q9NTX5 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
ECHDC1Q9NTX5 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ECHDC1Q9NTX5 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC23.21■■□□□ 1.31
ECHDC1Q9NTX5 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ECHDC1Q9NTX5 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ECHDC1Q9NTX5 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ECHDC1Q9NTX5 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms