Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.68■□□□□ 0.74
VPS45Q9NRW7 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
VPS45Q9NRW7 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
VPS45Q9NRW7 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
VPS45Q9NRW7 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.68■□□□□ 0.74
VPS45Q9NRW7 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
VPS45Q9NRW7 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VPS45Q9NRW7 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VPS45Q9NRW7 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VPS45Q9NRW7 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
VPS45Q9NRW7 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VPS45Q9NRW7 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
VPS45Q9NRW7 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VPS45Q9NRW7 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
VPS45Q9NRW7 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.67■□□□□ 0.74
VPS45Q9NRW7 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VPS45Q9NRW7 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VPS45Q9NRW7 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.67■□□□□ 0.74
VPS45Q9NRW7 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.67■□□□□ 0.74
VPS45Q9NRW7 AC063952.2-201ENST00000498792 1227 ntBASIC19.67■□□□□ 0.74
VPS45Q9NRW7 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
VPS45Q9NRW7 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.67■□□□□ 0.74
VPS45Q9NRW7 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.67■□□□□ 0.74
VPS45Q9NRW7 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.67■□□□□ 0.74
VPS45Q9NRW7 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.67■□□□□ 0.74
VPS45Q9NRW7 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
VPS45Q9NRW7 DGCR10-201ENST00000609839 495 ntBASIC19.67■□□□□ 0.74
VPS45Q9NRW7 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
VPS45Q9NRW7 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
VPS45Q9NRW7 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.67■□□□□ 0.74
VPS45Q9NRW7 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
VPS45Q9NRW7 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
VPS45Q9NRW7 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
VPS45Q9NRW7 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.67■□□□□ 0.74
VPS45Q9NRW7 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.67■□□□□ 0.74
VPS45Q9NRW7 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.67■□□□□ 0.74
VPS45Q9NRW7 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VPS45Q9NRW7 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VPS45Q9NRW7 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VPS45Q9NRW7 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VPS45Q9NRW7 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VPS45Q9NRW7 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VPS45Q9NRW7 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VPS45Q9NRW7 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
VPS45Q9NRW7 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.66■□□□□ 0.74
VPS45Q9NRW7 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
VPS45Q9NRW7 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.66■□□□□ 0.74
VPS45Q9NRW7 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.66■□□□□ 0.74
VPS45Q9NRW7 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VPS45Q9NRW7 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VPS45Q9NRW7 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
VPS45Q9NRW7 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
VPS45Q9NRW7 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.66■□□□□ 0.74
VPS45Q9NRW7 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VPS45Q9NRW7 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VPS45Q9NRW7 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
VPS45Q9NRW7 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
VPS45Q9NRW7 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.66■□□□□ 0.74
VPS45Q9NRW7 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VPS45Q9NRW7 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
VPS45Q9NRW7 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
VPS45Q9NRW7 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
VPS45Q9NRW7 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VPS45Q9NRW7 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VPS45Q9NRW7 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.65■□□□□ 0.74
VPS45Q9NRW7 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.65■□□□□ 0.74
VPS45Q9NRW7 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.65■□□□□ 0.74
VPS45Q9NRW7 C1QL1P1-201ENST00000568105 661 ntBASIC19.65■□□□□ 0.74
VPS45Q9NRW7 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.65■□□□□ 0.74
VPS45Q9NRW7 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
VPS45Q9NRW7 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
VPS45Q9NRW7 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VPS45Q9NRW7 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
VPS45Q9NRW7 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VPS45Q9NRW7 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
VPS45Q9NRW7 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VPS45Q9NRW7 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VPS45Q9NRW7 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.65■□□□□ 0.74
VPS45Q9NRW7 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
VPS45Q9NRW7 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
VPS45Q9NRW7 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VPS45Q9NRW7 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VPS45Q9NRW7 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VPS45Q9NRW7 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
VPS45Q9NRW7 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
VPS45Q9NRW7 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
VPS45Q9NRW7 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
VPS45Q9NRW7 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.64■□□□□ 0.73
VPS45Q9NRW7 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
VPS45Q9NRW7 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VPS45Q9NRW7 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VPS45Q9NRW7 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.64■□□□□ 0.73
VPS45Q9NRW7 TPM4P1-201ENST00000436100 807 ntBASIC19.64■□□□□ 0.73
VPS45Q9NRW7 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.64■□□□□ 0.73
VPS45Q9NRW7 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
VPS45Q9NRW7 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
VPS45Q9NRW7 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.64■□□□□ 0.73
VPS45Q9NRW7 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VPS45Q9NRW7 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
VPS45Q9NRW7 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms