Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.28■□□□□ 0.52
NECTIN3Q9NQS3 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NECTIN3Q9NQS3 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.28■□□□□ 0.52
NECTIN3Q9NQS3 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NECTIN3Q9NQS3 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.28■□□□□ 0.52
NECTIN3Q9NQS3 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NECTIN3Q9NQS3 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NECTIN3Q9NQS3 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NECTIN3Q9NQS3 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NECTIN3Q9NQS3 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NECTIN3Q9NQS3 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.28■□□□□ 0.52
NECTIN3Q9NQS3 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NECTIN3Q9NQS3 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.28■□□□□ 0.52
NECTIN3Q9NQS3 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
NECTIN3Q9NQS3 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NECTIN3Q9NQS3 AL353708.3-201ENST00000610272 989 ntBASIC18.28■□□□□ 0.52
NECTIN3Q9NQS3 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NECTIN3Q9NQS3 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.28■□□□□ 0.52
NECTIN3Q9NQS3 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.28■□□□□ 0.52
NECTIN3Q9NQS3 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NECTIN3Q9NQS3 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NECTIN3Q9NQS3 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NECTIN3Q9NQS3 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NECTIN3Q9NQS3 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NECTIN3Q9NQS3 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
NECTIN3Q9NQS3 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NECTIN3Q9NQS3 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
NECTIN3Q9NQS3 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NECTIN3Q9NQS3 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NECTIN3Q9NQS3 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NECTIN3Q9NQS3 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NECTIN3Q9NQS3 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.27■□□□□ 0.52
NECTIN3Q9NQS3 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
NECTIN3Q9NQS3 NIFKP9-201ENST00000419265 221 ntBASIC18.27■□□□□ 0.52
NECTIN3Q9NQS3 SNORA78-201ENST00000459373 127 ntBASIC18.27■□□□□ 0.52
NECTIN3Q9NQS3 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.27■□□□□ 0.52
NECTIN3Q9NQS3 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NECTIN3Q9NQS3 AC073195.1-201ENST00000607241 877 ntBASIC18.27■□□□□ 0.52
NECTIN3Q9NQS3 AP001412.1-201ENST00000608405 714 ntBASIC18.27■□□□□ 0.52
NECTIN3Q9NQS3 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NECTIN3Q9NQS3 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NECTIN3Q9NQS3 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
NECTIN3Q9NQS3 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
NECTIN3Q9NQS3 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.27■□□□□ 0.51
NECTIN3Q9NQS3 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
NECTIN3Q9NQS3 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
NECTIN3Q9NQS3 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
NECTIN3Q9NQS3 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
NECTIN3Q9NQS3 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.27■□□□□ 0.51
NECTIN3Q9NQS3 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
NECTIN3Q9NQS3 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
NECTIN3Q9NQS3 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.26■□□□□ 0.51
NECTIN3Q9NQS3 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.26■□□□□ 0.51
NECTIN3Q9NQS3 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NECTIN3Q9NQS3 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.26■□□□□ 0.51
NECTIN3Q9NQS3 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NECTIN3Q9NQS3 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.26■□□□□ 0.51
NECTIN3Q9NQS3 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.26■□□□□ 0.51
NECTIN3Q9NQS3 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NECTIN3Q9NQS3 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NECTIN3Q9NQS3 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NECTIN3Q9NQS3 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NECTIN3Q9NQS3 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
NECTIN3Q9NQS3 FAM197Y1-201ENST00000421178 764 ntBASIC18.26■□□□□ 0.51
NECTIN3Q9NQS3 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.26■□□□□ 0.51
NECTIN3Q9NQS3 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.26■□□□□ 0.51
NECTIN3Q9NQS3 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
NECTIN3Q9NQS3 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NECTIN3Q9NQS3 Z82202.1-201ENST00000623446 1880 ntBASIC18.26■□□□□ 0.51
NECTIN3Q9NQS3 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
NECTIN3Q9NQS3 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.26■□□□□ 0.51
NECTIN3Q9NQS3 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.26■□□□□ 0.51
NECTIN3Q9NQS3 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
NECTIN3Q9NQS3 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
NECTIN3Q9NQS3 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NECTIN3Q9NQS3 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NECTIN3Q9NQS3 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NECTIN3Q9NQS3 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NECTIN3Q9NQS3 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NECTIN3Q9NQS3 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.25■□□□□ 0.51
NECTIN3Q9NQS3 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
NECTIN3Q9NQS3 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NECTIN3Q9NQS3 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NECTIN3Q9NQS3 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NECTIN3Q9NQS3 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NECTIN3Q9NQS3 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NECTIN3Q9NQS3 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.25■□□□□ 0.51
NECTIN3Q9NQS3 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
NECTIN3Q9NQS3 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NECTIN3Q9NQS3 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.25■□□□□ 0.51
NECTIN3Q9NQS3 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NECTIN3Q9NQS3 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NECTIN3Q9NQS3 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NECTIN3Q9NQS3 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
NECTIN3Q9NQS3 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.25■□□□□ 0.51
NECTIN3Q9NQS3 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.25■□□□□ 0.51
NECTIN3Q9NQS3 TSPY7P-201ENST00000431358 1114 ntBASIC18.25■□□□□ 0.51
NECTIN3Q9NQS3 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.25■□□□□ 0.51
NECTIN3Q9NQS3 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.25■□□□□ 0.51
NECTIN3Q9NQS3 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms