Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 AL138781.2-201ENST00000617896 1843 ntBASIC18■□□□□ 0.47
NEUROD4Q9HD90 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18■□□□□ 0.47
NEUROD4Q9HD90 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18■□□□□ 0.47
NEUROD4Q9HD90 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
NEUROD4Q9HD90 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NEUROD4Q9HD90 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
NEUROD4Q9HD90 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NEUROD4Q9HD90 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NEUROD4Q9HD90 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NEUROD4Q9HD90 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
NEUROD4Q9HD90 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18■□□□□ 0.47
NEUROD4Q9HD90 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18■□□□□ 0.47
NEUROD4Q9HD90 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
NEUROD4Q9HD90 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18■□□□□ 0.47
NEUROD4Q9HD90 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18■□□□□ 0.47
NEUROD4Q9HD90 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18■□□□□ 0.47
NEUROD4Q9HD90 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18■□□□□ 0.47
NEUROD4Q9HD90 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NEUROD4Q9HD90 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NEUROD4Q9HD90 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
NEUROD4Q9HD90 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
NEUROD4Q9HD90 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18■□□□□ 0.47
NEUROD4Q9HD90 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NEUROD4Q9HD90 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NEUROD4Q9HD90 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18■□□□□ 0.47
NEUROD4Q9HD90 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
NEUROD4Q9HD90 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.99■□□□□ 0.47
NEUROD4Q9HD90 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.99■□□□□ 0.47
NEUROD4Q9HD90 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.99■□□□□ 0.47
NEUROD4Q9HD90 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
NEUROD4Q9HD90 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NEUROD4Q9HD90 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
NEUROD4Q9HD90 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
NEUROD4Q9HD90 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
NEUROD4Q9HD90 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NEUROD4Q9HD90 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.99■□□□□ 0.47
NEUROD4Q9HD90 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.99■□□□□ 0.47
NEUROD4Q9HD90 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
NEUROD4Q9HD90 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
NEUROD4Q9HD90 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NEUROD4Q9HD90 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.99■□□□□ 0.47
NEUROD4Q9HD90 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.99■□□□□ 0.47
NEUROD4Q9HD90 AC128676.1-201ENST00000454392 318 ntBASIC17.99■□□□□ 0.47
NEUROD4Q9HD90 KRT16P5-201ENST00000455284 522 ntBASIC17.99■□□□□ 0.47
NEUROD4Q9HD90 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.99■□□□□ 0.47
NEUROD4Q9HD90 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NEUROD4Q9HD90 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.99■□□□□ 0.47
NEUROD4Q9HD90 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.99■□□□□ 0.47
NEUROD4Q9HD90 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
NEUROD4Q9HD90 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
NEUROD4Q9HD90 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NEUROD4Q9HD90 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NEUROD4Q9HD90 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.99■□□□□ 0.47
NEUROD4Q9HD90 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
NEUROD4Q9HD90 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.99■□□□□ 0.47
NEUROD4Q9HD90 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NEUROD4Q9HD90 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
NEUROD4Q9HD90 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.99■□□□□ 0.47
NEUROD4Q9HD90 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NEUROD4Q9HD90 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.98■□□□□ 0.47
NEUROD4Q9HD90 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
NEUROD4Q9HD90 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NEUROD4Q9HD90 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.98■□□□□ 0.47
NEUROD4Q9HD90 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
NEUROD4Q9HD90 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.98■□□□□ 0.47
NEUROD4Q9HD90 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NEUROD4Q9HD90 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
NEUROD4Q9HD90 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
NEUROD4Q9HD90 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NEUROD4Q9HD90 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.98■□□□□ 0.47
NEUROD4Q9HD90 AC233263.1-201ENST00000578059 224 ntBASIC17.98■□□□□ 0.47
NEUROD4Q9HD90 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.98■□□□□ 0.47
NEUROD4Q9HD90 AL023875.1-201ENST00000640777 796 ntBASIC17.98■□□□□ 0.47
NEUROD4Q9HD90 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NEUROD4Q9HD90 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NEUROD4Q9HD90 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.98■□□□□ 0.47
NEUROD4Q9HD90 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NEUROD4Q9HD90 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NEUROD4Q9HD90 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.98■□□□□ 0.47
NEUROD4Q9HD90 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NEUROD4Q9HD90 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NEUROD4Q9HD90 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NEUROD4Q9HD90 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
NEUROD4Q9HD90 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
NEUROD4Q9HD90 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NEUROD4Q9HD90 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.98■□□□□ 0.47
NEUROD4Q9HD90 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NEUROD4Q9HD90 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
NEUROD4Q9HD90 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
NEUROD4Q9HD90 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NEUROD4Q9HD90 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NEUROD4Q9HD90 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.97■□□□□ 0.47
NEUROD4Q9HD90 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NEUROD4Q9HD90 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NEUROD4Q9HD90 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.97■□□□□ 0.47
NEUROD4Q9HD90 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NEUROD4Q9HD90 AC093525.10-201ENST00000625130 1569 ntBASIC17.97■□□□□ 0.47
NEUROD4Q9HD90 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NEUROD4Q9HD90 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.97■□□□□ 0.47
NEUROD4Q9HD90 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms