Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20■□□□□ 0.79
CD248Q9HCU0 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CD248Q9HCU0 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CD248Q9HCU0 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CD248Q9HCU0 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CD248Q9HCU0 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CD248Q9HCU0 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CD248Q9HCU0 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CD248Q9HCU0 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CD248Q9HCU0 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.99■□□□□ 0.79
CD248Q9HCU0 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CD248Q9HCU0 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.99■□□□□ 0.79
CD248Q9HCU0 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CD248Q9HCU0 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CD248Q9HCU0 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CD248Q9HCU0 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CD248Q9HCU0 AC018470.1-201ENST00000624790 3129 ntBASIC19.99■□□□□ 0.79
CD248Q9HCU0 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CD248Q9HCU0 UNC93B2-201ENST00000285383 730 ntBASIC19.99■□□□□ 0.79
CD248Q9HCU0 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CD248Q9HCU0 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CD248Q9HCU0 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.99■□□□□ 0.79
CD248Q9HCU0 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.99■□□□□ 0.79
CD248Q9HCU0 RN7SL850P-201ENST00000579959 291 ntBASIC19.99■□□□□ 0.79
CD248Q9HCU0 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.99■□□□□ 0.79
CD248Q9HCU0 MIR6786-201ENST00000616843 113 ntBASIC19.99■□□□□ 0.79
CD248Q9HCU0 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.99■□□□□ 0.79
CD248Q9HCU0 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CD248Q9HCU0 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CD248Q9HCU0 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CD248Q9HCU0 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CD248Q9HCU0 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CD248Q9HCU0 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.99■□□□□ 0.79
CD248Q9HCU0 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CD248Q9HCU0 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CD248Q9HCU0 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CD248Q9HCU0 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CD248Q9HCU0 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.98■□□□□ 0.79
CD248Q9HCU0 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
CD248Q9HCU0 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.98■□□□□ 0.79
CD248Q9HCU0 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CD248Q9HCU0 TCF3P1-201ENST00000423021 1937 ntBASIC19.98■□□□□ 0.79
CD248Q9HCU0 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CD248Q9HCU0 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.98■□□□□ 0.79
CD248Q9HCU0 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.98■□□□□ 0.79
CD248Q9HCU0 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CD248Q9HCU0 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CD248Q9HCU0 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
CD248Q9HCU0 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.98■□□□□ 0.79
CD248Q9HCU0 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.98■□□□□ 0.79
CD248Q9HCU0 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.98■□□□□ 0.79
CD248Q9HCU0 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.98■□□□□ 0.79
CD248Q9HCU0 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CD248Q9HCU0 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.98■□□□□ 0.79
CD248Q9HCU0 CR392000.1-201ENST00000624770 1228 ntBASIC19.98■□□□□ 0.79
CD248Q9HCU0 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.98■□□□□ 0.79
CD248Q9HCU0 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CD248Q9HCU0 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CD248Q9HCU0 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CD248Q9HCU0 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CD248Q9HCU0 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CD248Q9HCU0 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CD248Q9HCU0 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CD248Q9HCU0 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.98■□□□□ 0.79
CD248Q9HCU0 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
CD248Q9HCU0 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CD248Q9HCU0 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
CD248Q9HCU0 FP700111.2-201ENST00000619190 1892 ntBASIC19.97■□□□□ 0.79
CD248Q9HCU0 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.97■□□□□ 0.79
CD248Q9HCU0 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CD248Q9HCU0 AC116351.2-201ENST00000606540 1585 ntBASIC19.97■□□□□ 0.79
CD248Q9HCU0 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
CD248Q9HCU0 KRT16P1-201ENST00000399124 1418 ntBASIC19.97■□□□□ 0.79
CD248Q9HCU0 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CD248Q9HCU0 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CD248Q9HCU0 MESTP1-201ENST00000404287 994 ntBASIC19.97■□□□□ 0.79
CD248Q9HCU0 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.97■□□□□ 0.79
CD248Q9HCU0 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CD248Q9HCU0 FITM1-202ENST00000559294 800 ntBASIC19.97■□□□□ 0.79
CD248Q9HCU0 C1QL1P1-201ENST00000568105 661 ntBASIC19.97■□□□□ 0.79
CD248Q9HCU0 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.97■□□□□ 0.79
CD248Q9HCU0 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.97■□□□□ 0.79
CD248Q9HCU0 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CD248Q9HCU0 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.97■□□□□ 0.79
CD248Q9HCU0 AP000997.3-201ENST00000623333 2250 ntBASIC19.97■□□□□ 0.79
CD248Q9HCU0 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.97■□□□□ 0.79
CD248Q9HCU0 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
CD248Q9HCU0 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.97■□□□□ 0.79
CD248Q9HCU0 CYP2D8P-201ENST00000433633 1490 ntBASIC19.97■□□□□ 0.79
CD248Q9HCU0 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CD248Q9HCU0 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.97■□□□□ 0.79
CD248Q9HCU0 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CD248Q9HCU0 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CD248Q9HCU0 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CD248Q9HCU0 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CD248Q9HCU0 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CD248Q9HCU0 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CD248Q9HCU0 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.96■□□□□ 0.79
CD248Q9HCU0 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.96■□□□□ 0.79
CD248Q9HCU0 TFP1-202ENST00000475455 1573 ntBASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms