Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATP6V0A4Q9HBG4 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATP6V0A4Q9HBG4 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ATP6V0A4Q9HBG4 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC21.2■□□□□ 0.98
ATP6V0A4Q9HBG4 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC21.2■□□□□ 0.98
ATP6V0A4Q9HBG4 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.2■□□□□ 0.98
ATP6V0A4Q9HBG4 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
ATP6V0A4Q9HBG4 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
ATP6V0A4Q9HBG4 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ATP6V0A4Q9HBG4 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.19■□□□□ 0.98
ATP6V0A4Q9HBG4 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC21.19■□□□□ 0.98
ATP6V0A4Q9HBG4 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.19■□□□□ 0.98
ATP6V0A4Q9HBG4 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
ATP6V0A4Q9HBG4 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
ATP6V0A4Q9HBG4 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP6V0A4Q9HBG4 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP6V0A4Q9HBG4 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ATP6V0A4Q9HBG4 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC21.19■□□□□ 0.98
ATP6V0A4Q9HBG4 HIST1H2APS4-201ENST00000362070 348 ntBASIC21.19■□□□□ 0.98
ATP6V0A4Q9HBG4 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC21.19■□□□□ 0.98
ATP6V0A4Q9HBG4 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP6V0A4Q9HBG4 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21.19■□□□□ 0.98
ATP6V0A4Q9HBG4 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC21.19■□□□□ 0.98
ATP6V0A4Q9HBG4 AC010203.1-204ENST00000548782 407 ntBASIC21.19■□□□□ 0.98
ATP6V0A4Q9HBG4 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC21.19■□□□□ 0.98
ATP6V0A4Q9HBG4 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
ATP6V0A4Q9HBG4 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP6V0A4Q9HBG4 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP6V0A4Q9HBG4 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.19■□□□□ 0.98
ATP6V0A4Q9HBG4 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.19■□□□□ 0.98
ATP6V0A4Q9HBG4 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP6V0A4Q9HBG4 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.19■□□□□ 0.98
ATP6V0A4Q9HBG4 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
ATP6V0A4Q9HBG4 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
ATP6V0A4Q9HBG4 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ATP6V0A4Q9HBG4 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP6V0A4Q9HBG4 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP6V0A4Q9HBG4 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC21.19■□□□□ 0.98
ATP6V0A4Q9HBG4 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP6V0A4Q9HBG4 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ATP6V0A4Q9HBG4 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC21.18■□□□□ 0.98
ATP6V0A4Q9HBG4 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC21.18■□□□□ 0.98
ATP6V0A4Q9HBG4 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.18■□□□□ 0.98
ATP6V0A4Q9HBG4 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ATP6V0A4Q9HBG4 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.18■□□□□ 0.98
ATP6V0A4Q9HBG4 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC21.18■□□□□ 0.98
ATP6V0A4Q9HBG4 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.18■□□□□ 0.98
ATP6V0A4Q9HBG4 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.18■□□□□ 0.98
ATP6V0A4Q9HBG4 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC21.18■□□□□ 0.98
ATP6V0A4Q9HBG4 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
ATP6V0A4Q9HBG4 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC21.18■□□□□ 0.98
ATP6V0A4Q9HBG4 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC21.18■□□□□ 0.98
ATP6V0A4Q9HBG4 AC104076.2-201ENST00000448912 469 ntBASIC21.18■□□□□ 0.98
ATP6V0A4Q9HBG4 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC21.18■□□□□ 0.98
ATP6V0A4Q9HBG4 RBM42-202ENST00000586618 771 ntTSL 3 BASIC21.18■□□□□ 0.98
ATP6V0A4Q9HBG4 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.18■□□□□ 0.98
ATP6V0A4Q9HBG4 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
ATP6V0A4Q9HBG4 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP6V0A4Q9HBG4 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC21.18■□□□□ 0.98
ATP6V0A4Q9HBG4 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC21.18■□□□□ 0.98
ATP6V0A4Q9HBG4 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.18■□□□□ 0.98
ATP6V0A4Q9HBG4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP6V0A4Q9HBG4 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC21.18■□□□□ 0.98
ATP6V0A4Q9HBG4 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP6V0A4Q9HBG4 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ATP6V0A4Q9HBG4 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP6V0A4Q9HBG4 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP6V0A4Q9HBG4 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
ATP6V0A4Q9HBG4 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP6V0A4Q9HBG4 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
ATP6V0A4Q9HBG4 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATP6V0A4Q9HBG4 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATP6V0A4Q9HBG4 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP6V0A4Q9HBG4 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP6V0A4Q9HBG4 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
ATP6V0A4Q9HBG4 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATP6V0A4Q9HBG4 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATP6V0A4Q9HBG4 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
ATP6V0A4Q9HBG4 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP6V0A4Q9HBG4 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP6V0A4Q9HBG4 SLC25A1P2-201ENST00000430693 912 ntBASIC21.17■□□□□ 0.98
ATP6V0A4Q9HBG4 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP6V0A4Q9HBG4 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC21.17■□□□□ 0.98
ATP6V0A4Q9HBG4 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATP6V0A4Q9HBG4 DUX4L26-201ENST00000489078 1255 ntBASIC21.17■□□□□ 0.98
ATP6V0A4Q9HBG4 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC21.17■□□□□ 0.98
ATP6V0A4Q9HBG4 TPM1-226ENST00000560959 925 ntTSL 2 BASIC21.17■□□□□ 0.98
ATP6V0A4Q9HBG4 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP6V0A4Q9HBG4 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC21.17■□□□□ 0.98
ATP6V0A4Q9HBG4 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP6V0A4Q9HBG4 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP6V0A4Q9HBG4 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
ATP6V0A4Q9HBG4 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATP6V0A4Q9HBG4 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
ATP6V0A4Q9HBG4 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP6V0A4Q9HBG4 STX6-204ENST00000542060 4809 ntTSL 2 BASIC21.17■□□□□ 0.98
ATP6V0A4Q9HBG4 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
ATP6V0A4Q9HBG4 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP6V0A4Q9HBG4 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP6V0A4Q9HBG4 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms