Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BRF2Q9HAW0 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
BRF2Q9HAW0 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
BRF2Q9HAW0 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
BRF2Q9HAW0 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
BRF2Q9HAW0 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
BRF2Q9HAW0 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
BRF2Q9HAW0 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
BRF2Q9HAW0 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BRF2Q9HAW0 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BRF2Q9HAW0 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
BRF2Q9HAW0 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.24■□□□□ 0.51
BRF2Q9HAW0 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
BRF2Q9HAW0 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
BRF2Q9HAW0 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BRF2Q9HAW0 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BRF2Q9HAW0 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BRF2Q9HAW0 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BRF2Q9HAW0 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BRF2Q9HAW0 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BRF2Q9HAW0 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
BRF2Q9HAW0 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
BRF2Q9HAW0 AC004980.1-204ENST00000429707 299 ntBASIC18.24■□□□□ 0.51
BRF2Q9HAW0 RPPH1-201ENST00000516869 333 ntBASIC18.24■□□□□ 0.51
BRF2Q9HAW0 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.24■□□□□ 0.51
BRF2Q9HAW0 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.24■□□□□ 0.51
BRF2Q9HAW0 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.24■□□□□ 0.51
BRF2Q9HAW0 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.24■□□□□ 0.51
BRF2Q9HAW0 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
BRF2Q9HAW0 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
BRF2Q9HAW0 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BRF2Q9HAW0 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BRF2Q9HAW0 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.24■□□□□ 0.51
BRF2Q9HAW0 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
BRF2Q9HAW0 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
BRF2Q9HAW0 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
BRF2Q9HAW0 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
BRF2Q9HAW0 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BRF2Q9HAW0 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
BRF2Q9HAW0 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
BRF2Q9HAW0 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BRF2Q9HAW0 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
BRF2Q9HAW0 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.23■□□□□ 0.51
BRF2Q9HAW0 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
BRF2Q9HAW0 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
BRF2Q9HAW0 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
BRF2Q9HAW0 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
BRF2Q9HAW0 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
BRF2Q9HAW0 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
BRF2Q9HAW0 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
BRF2Q9HAW0 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
BRF2Q9HAW0 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.23■□□□□ 0.51
BRF2Q9HAW0 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.23■□□□□ 0.51
BRF2Q9HAW0 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.23■□□□□ 0.51
BRF2Q9HAW0 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
BRF2Q9HAW0 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
BRF2Q9HAW0 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
BRF2Q9HAW0 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
BRF2Q9HAW0 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
BRF2Q9HAW0 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
BRF2Q9HAW0 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
BRF2Q9HAW0 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.23■□□□□ 0.51
BRF2Q9HAW0 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.23■□□□□ 0.51
BRF2Q9HAW0 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
BRF2Q9HAW0 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
BRF2Q9HAW0 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
BRF2Q9HAW0 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
BRF2Q9HAW0 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.22■□□□□ 0.51
BRF2Q9HAW0 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
BRF2Q9HAW0 PRSS44-201ENST00000515154 1146 ntBASIC18.22■□□□□ 0.51
BRF2Q9HAW0 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.22■□□□□ 0.51
BRF2Q9HAW0 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.22■□□□□ 0.51
BRF2Q9HAW0 RARRES2P10-201ENST00000564312 460 ntBASIC18.22■□□□□ 0.51
BRF2Q9HAW0 AC026271.3-201ENST00000571884 352 ntBASIC18.22■□□□□ 0.51
BRF2Q9HAW0 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.22■□□□□ 0.51
BRF2Q9HAW0 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BRF2Q9HAW0 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BRF2Q9HAW0 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
BRF2Q9HAW0 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
BRF2Q9HAW0 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.22■□□□□ 0.51
BRF2Q9HAW0 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
BRF2Q9HAW0 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.22■□□□□ 0.51
BRF2Q9HAW0 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
BRF2Q9HAW0 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
BRF2Q9HAW0 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
BRF2Q9HAW0 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
BRF2Q9HAW0 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BRF2Q9HAW0 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BRF2Q9HAW0 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BRF2Q9HAW0 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BRF2Q9HAW0 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
BRF2Q9HAW0 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BRF2Q9HAW0 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
BRF2Q9HAW0 AL512353.2-201ENST00000448759 1962 ntBASIC18.21■□□□□ 0.51
BRF2Q9HAW0 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
BRF2Q9HAW0 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
BRF2Q9HAW0 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
BRF2Q9HAW0 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BRF2Q9HAW0 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BRF2Q9HAW0 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms