Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
POLR1BQ9H9Y6 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
POLR1BQ9H9Y6 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.85■□□□□ 0.61
POLR1BQ9H9Y6 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
POLR1BQ9H9Y6 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.85■□□□□ 0.61
POLR1BQ9H9Y6 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.85■□□□□ 0.61
POLR1BQ9H9Y6 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
POLR1BQ9H9Y6 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.84■□□□□ 0.61
POLR1BQ9H9Y6 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
POLR1BQ9H9Y6 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
POLR1BQ9H9Y6 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
POLR1BQ9H9Y6 NEFHP1-201ENST00000412845 2629 ntBASIC18.84■□□□□ 0.61
POLR1BQ9H9Y6 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
POLR1BQ9H9Y6 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
POLR1BQ9H9Y6 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
POLR1BQ9H9Y6 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
POLR1BQ9H9Y6 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
POLR1BQ9H9Y6 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
POLR1BQ9H9Y6 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
POLR1BQ9H9Y6 MESTP1-201ENST00000404287 994 ntBASIC18.84■□□□□ 0.61
POLR1BQ9H9Y6 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
POLR1BQ9H9Y6 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
POLR1BQ9H9Y6 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.84■□□□□ 0.61
POLR1BQ9H9Y6 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.84■□□□□ 0.61
POLR1BQ9H9Y6 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.84■□□□□ 0.61
POLR1BQ9H9Y6 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
POLR1BQ9H9Y6 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
POLR1BQ9H9Y6 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
POLR1BQ9H9Y6 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
POLR1BQ9H9Y6 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.84■□□□□ 0.61
POLR1BQ9H9Y6 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.84■□□□□ 0.61
POLR1BQ9H9Y6 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
POLR1BQ9H9Y6 AP006587.1-201ENST00000534129 1502 ntBASIC18.84■□□□□ 0.61
POLR1BQ9H9Y6 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
POLR1BQ9H9Y6 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
POLR1BQ9H9Y6 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.83■□□□□ 0.61
POLR1BQ9H9Y6 AC125437.2-201ENST00000625180 2167 ntBASIC18.83■□□□□ 0.61
POLR1BQ9H9Y6 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
POLR1BQ9H9Y6 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
POLR1BQ9H9Y6 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.83■□□□□ 0.61
POLR1BQ9H9Y6 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
POLR1BQ9H9Y6 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
POLR1BQ9H9Y6 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.83■□□□□ 0.61
POLR1BQ9H9Y6 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
POLR1BQ9H9Y6 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
POLR1BQ9H9Y6 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.83■□□□□ 0.61
POLR1BQ9H9Y6 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
POLR1BQ9H9Y6 ECEL1P2-202ENST00000465689 757 ntBASIC18.83■□□□□ 0.6
POLR1BQ9H9Y6 LINC01238-205ENST00000567549 1107 ntBASIC18.83■□□□□ 0.6
POLR1BQ9H9Y6 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
POLR1BQ9H9Y6 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
POLR1BQ9H9Y6 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.83■□□□□ 0.6
POLR1BQ9H9Y6 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
POLR1BQ9H9Y6 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.6
POLR1BQ9H9Y6 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
POLR1BQ9H9Y6 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
POLR1BQ9H9Y6 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.83■□□□□ 0.6
POLR1BQ9H9Y6 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
POLR1BQ9H9Y6 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
POLR1BQ9H9Y6 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.83■□□□□ 0.6
POLR1BQ9H9Y6 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
POLR1BQ9H9Y6 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
POLR1BQ9H9Y6 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLR1BQ9H9Y6 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLR1BQ9H9Y6 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLR1BQ9H9Y6 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.82■□□□□ 0.6
POLR1BQ9H9Y6 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.82■□□□□ 0.6
POLR1BQ9H9Y6 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLR1BQ9H9Y6 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLR1BQ9H9Y6 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLR1BQ9H9Y6 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLR1BQ9H9Y6 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
POLR1BQ9H9Y6 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
POLR1BQ9H9Y6 B3GAT3P1-201ENST00000471720 806 ntBASIC18.82■□□□□ 0.6
POLR1BQ9H9Y6 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.82■□□□□ 0.6
POLR1BQ9H9Y6 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
POLR1BQ9H9Y6 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
POLR1BQ9H9Y6 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.82■□□□□ 0.6
POLR1BQ9H9Y6 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLR1BQ9H9Y6 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
POLR1BQ9H9Y6 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLR1BQ9H9Y6 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.82■□□□□ 0.6
POLR1BQ9H9Y6 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
POLR1BQ9H9Y6 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLR1BQ9H9Y6 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
POLR1BQ9H9Y6 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR1BQ9H9Y6 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR1BQ9H9Y6 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
POLR1BQ9H9Y6 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR1BQ9H9Y6 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
POLR1BQ9H9Y6 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR1BQ9H9Y6 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR1BQ9H9Y6 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR1BQ9H9Y6 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
POLR1BQ9H9Y6 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.81■□□□□ 0.6
POLR1BQ9H9Y6 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
POLR1BQ9H9Y6 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR1BQ9H9Y6 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR1BQ9H9Y6 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.81■□□□□ 0.6
POLR1BQ9H9Y6 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms