Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.37■□□□□ 0.69
LRRC40Q9H9A6 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LRRC40Q9H9A6 KRT8P41-201ENST00000533985 1514 ntBASIC19.37■□□□□ 0.69
LRRC40Q9H9A6 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRC40Q9H9A6 NIFKP9-201ENST00000419265 221 ntBASIC19.37■□□□□ 0.69
LRRC40Q9H9A6 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRC40Q9H9A6 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
LRRC40Q9H9A6 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LRRC40Q9H9A6 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
LRRC40Q9H9A6 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRC40Q9H9A6 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
LRRC40Q9H9A6 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRC40Q9H9A6 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
LRRC40Q9H9A6 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
LRRC40Q9H9A6 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.37■□□□□ 0.69
LRRC40Q9H9A6 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.36■□□□□ 0.69
LRRC40Q9H9A6 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC40Q9H9A6 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC40Q9H9A6 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC40Q9H9A6 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC40Q9H9A6 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC40Q9H9A6 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC40Q9H9A6 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC40Q9H9A6 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC40Q9H9A6 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC40Q9H9A6 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
LRRC40Q9H9A6 TSPY23P-201ENST00000440136 739 ntBASIC19.36■□□□□ 0.69
LRRC40Q9H9A6 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC40Q9H9A6 FAM201B-201ENST00000458407 597 ntBASIC19.36■□□□□ 0.69
LRRC40Q9H9A6 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC40Q9H9A6 AP002982.1-201ENST00000492365 877 ntBASIC19.36■□□□□ 0.69
LRRC40Q9H9A6 Z85996.1-201ENST00000494644 937 ntBASIC19.36■□□□□ 0.69
LRRC40Q9H9A6 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.36■□□□□ 0.69
LRRC40Q9H9A6 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.36■□□□□ 0.69
LRRC40Q9H9A6 RPPH1-201ENST00000516869 333 ntBASIC19.36■□□□□ 0.69
LRRC40Q9H9A6 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.36■□□□□ 0.69
LRRC40Q9H9A6 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.36■□□□□ 0.69
LRRC40Q9H9A6 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.36■□□□□ 0.69
LRRC40Q9H9A6 AL353708.3-201ENST00000610272 989 ntBASIC19.36■□□□□ 0.69
LRRC40Q9H9A6 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC40Q9H9A6 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.36■□□□□ 0.69
LRRC40Q9H9A6 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC40Q9H9A6 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC40Q9H9A6 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.36■□□□□ 0.69
LRRC40Q9H9A6 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC40Q9H9A6 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC40Q9H9A6 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC40Q9H9A6 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC40Q9H9A6 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC40Q9H9A6 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC40Q9H9A6 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.36■□□□□ 0.69
LRRC40Q9H9A6 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC40Q9H9A6 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC40Q9H9A6 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.35■□□□□ 0.69
LRRC40Q9H9A6 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRRC40Q9H9A6 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.35■□□□□ 0.69
LRRC40Q9H9A6 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRRC40Q9H9A6 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LRRC40Q9H9A6 HTR7P1-201ENST00000538670 1336 ntBASIC19.35■□□□□ 0.69
LRRC40Q9H9A6 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.35■□□□□ 0.69
LRRC40Q9H9A6 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LRRC40Q9H9A6 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LRRC40Q9H9A6 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
LRRC40Q9H9A6 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
LRRC40Q9H9A6 AL353807.1-201ENST00000427475 662 ntBASIC19.35■□□□□ 0.69
LRRC40Q9H9A6 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LRRC40Q9H9A6 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.35■□□□□ 0.69
LRRC40Q9H9A6 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.35■□□□□ 0.69
LRRC40Q9H9A6 AC131212.4-201ENST00000623606 975 ntBASIC19.35■□□□□ 0.69
LRRC40Q9H9A6 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRRC40Q9H9A6 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LRRC40Q9H9A6 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRRC40Q9H9A6 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRRC40Q9H9A6 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRRC40Q9H9A6 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRRC40Q9H9A6 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRRC40Q9H9A6 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRRC40Q9H9A6 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LRRC40Q9H9A6 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LRRC40Q9H9A6 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
LRRC40Q9H9A6 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRRC40Q9H9A6 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRRC40Q9H9A6 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
LRRC40Q9H9A6 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.34■□□□□ 0.69
LRRC40Q9H9A6 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRRC40Q9H9A6 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.34■□□□□ 0.69
LRRC40Q9H9A6 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRRC40Q9H9A6 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.34■□□□□ 0.69
LRRC40Q9H9A6 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.34■□□□□ 0.69
LRRC40Q9H9A6 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.34■□□□□ 0.69
LRRC40Q9H9A6 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
LRRC40Q9H9A6 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.34■□□□□ 0.69
LRRC40Q9H9A6 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.34■□□□□ 0.69
LRRC40Q9H9A6 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
LRRC40Q9H9A6 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.34■□□□□ 0.69
LRRC40Q9H9A6 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LRRC40Q9H9A6 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRRC40Q9H9A6 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRRC40Q9H9A6 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRRC40Q9H9A6 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms