Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 BUB3-202ENST00000368859 667 ntTSL 3 BASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 HMGA1P5-201ENST00000412453 271 ntBASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 NMU-205ENST00000511469 756 ntTSL 3 BASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 AC022616.7-201ENST00000525383 220 ntBASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 ETFA-216ENST00000560726 942 ntTSL 3 BASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 AL353719.1-201ENST00000566847 864 ntBASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 AL590326.2-201ENST00000625139 305 ntBASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 DFFB-212ENST00000625756 649 ntTSL 5 BASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 TEX21P-204ENST00000641479 1693 ntBASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
KRTAP4-3Q9BYR4 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 AC093484.2-201ENST00000580996 2166 ntBASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 GPAT2P1-201ENST00000444924 1672 ntBASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
KRTAP4-3Q9BYR4 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms