Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC12.72□□□□□ -0.37
LITAFQ99732 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LITAFQ99732 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
LITAFQ99732 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LITAFQ99732 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LITAFQ99732 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC12.71□□□□□ -0.37
LITAFQ99732 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LITAFQ99732 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LITAFQ99732 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
LITAFQ99732 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
LITAFQ99732 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LITAFQ99732 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LITAFQ99732 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC12.71□□□□□ -0.37
LITAFQ99732 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
LITAFQ99732 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
LITAFQ99732 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC12.71□□□□□ -0.37
LITAFQ99732 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LITAFQ99732 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC12.71□□□□□ -0.37
LITAFQ99732 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LITAFQ99732 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
LITAFQ99732 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC12.71□□□□□ -0.37
LITAFQ99732 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC12.71□□□□□ -0.37
LITAFQ99732 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC12.71□□□□□ -0.37
LITAFQ99732 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC12.71□□□□□ -0.37
LITAFQ99732 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC12.71□□□□□ -0.37
LITAFQ99732 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
LITAFQ99732 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC12.71□□□□□ -0.37
LITAFQ99732 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
LITAFQ99732 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
LITAFQ99732 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LITAFQ99732 AC116351.2-201ENST00000606540 1585 ntBASIC12.71□□□□□ -0.37
LITAFQ99732 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
LITAFQ99732 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC12.71□□□□□ -0.38
LITAFQ99732 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
LITAFQ99732 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LITAFQ99732 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LITAFQ99732 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LITAFQ99732 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
LITAFQ99732 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
LITAFQ99732 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC12.71□□□□□ -0.38
LITAFQ99732 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC12.71□□□□□ -0.38
LITAFQ99732 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LITAFQ99732 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LITAFQ99732 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
LITAFQ99732 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC12.71□□□□□ -0.38
LITAFQ99732 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
LITAFQ99732 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
LITAFQ99732 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LITAFQ99732 GAS2L1P2-201ENST00000436355 1356 ntBASIC12.7□□□□□ -0.38
LITAFQ99732 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LITAFQ99732 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LITAFQ99732 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LITAFQ99732 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
LITAFQ99732 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
LITAFQ99732 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LITAFQ99732 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LITAFQ99732 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LITAFQ99732 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC12.7□□□□□ -0.38
LITAFQ99732 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC12.7□□□□□ -0.38
LITAFQ99732 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LITAFQ99732 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
LITAFQ99732 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
LITAFQ99732 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
LITAFQ99732 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LITAFQ99732 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LITAFQ99732 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LITAFQ99732 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LITAFQ99732 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LITAFQ99732 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LITAFQ99732 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LITAFQ99732 AL136162.1-201ENST00000607711 1078 ntBASIC12.7□□□□□ -0.38
LITAFQ99732 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
LITAFQ99732 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC12.7□□□□□ -0.38
LITAFQ99732 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LITAFQ99732 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC12.7□□□□□ -0.38
LITAFQ99732 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LITAFQ99732 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LITAFQ99732 AC135776.1-201ENST00000319817 2481 ntBASIC12.7□□□□□ -0.38
LITAFQ99732 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LITAFQ99732 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LITAFQ99732 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC12.7□□□□□ -0.38
LITAFQ99732 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC12.7□□□□□ -0.38
LITAFQ99732 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC12.7□□□□□ -0.38
LITAFQ99732 AC108860.2-201ENST00000562760 2183 ntBASIC12.7□□□□□ -0.38
LITAFQ99732 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC12.7□□□□□ -0.38
LITAFQ99732 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC12.7□□□□□ -0.38
LITAFQ99732 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC12.7□□□□□ -0.38
LITAFQ99732 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
LITAFQ99732 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC12.69□□□□□ -0.38
LITAFQ99732 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LITAFQ99732 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
LITAFQ99732 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LITAFQ99732 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC12.69□□□□□ -0.38
LITAFQ99732 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LITAFQ99732 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LITAFQ99732 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LITAFQ99732 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LITAFQ99732 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
LITAFQ99732 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC12.69□□□□□ -0.38
LITAFQ99732 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms