Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 MIR663A-201ENST00000385250 93 ntBASIC18.33■□□□□ 0.52
VPS33AQ96AX1 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.33■□□□□ 0.52
VPS33AQ96AX1 DUSP5P2-201ENST00000426873 1033 ntBASIC18.33■□□□□ 0.52
VPS33AQ96AX1 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
VPS33AQ96AX1 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.33■□□□□ 0.52
VPS33AQ96AX1 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.33■□□□□ 0.52
VPS33AQ96AX1 RAP2CP1-201ENST00000605103 478 ntBASIC18.33■□□□□ 0.52
VPS33AQ96AX1 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
VPS33AQ96AX1 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VPS33AQ96AX1 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
VPS33AQ96AX1 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
VPS33AQ96AX1 AC079598.2-202ENST00000546624 1451 ntBASIC18.33■□□□□ 0.52
VPS33AQ96AX1 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VPS33AQ96AX1 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VPS33AQ96AX1 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
VPS33AQ96AX1 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.32■□□□□ 0.52
VPS33AQ96AX1 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VPS33AQ96AX1 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.32■□□□□ 0.52
VPS33AQ96AX1 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VPS33AQ96AX1 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
VPS33AQ96AX1 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VPS33AQ96AX1 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
VPS33AQ96AX1 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VPS33AQ96AX1 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VPS33AQ96AX1 MIPEPP3-201ENST00000412105 444 ntBASIC18.32■□□□□ 0.52
VPS33AQ96AX1 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.32■□□□□ 0.52
VPS33AQ96AX1 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
VPS33AQ96AX1 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.32■□□□□ 0.52
VPS33AQ96AX1 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VPS33AQ96AX1 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.32■□□□□ 0.52
VPS33AQ96AX1 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.32■□□□□ 0.52
VPS33AQ96AX1 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.32■□□□□ 0.52
VPS33AQ96AX1 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VPS33AQ96AX1 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VPS33AQ96AX1 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.32■□□□□ 0.52
VPS33AQ96AX1 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
VPS33AQ96AX1 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.32■□□□□ 0.52
VPS33AQ96AX1 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VPS33AQ96AX1 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.32■□□□□ 0.52
VPS33AQ96AX1 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VPS33AQ96AX1 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.32■□□□□ 0.52
VPS33AQ96AX1 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VPS33AQ96AX1 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.32■□□□□ 0.52
VPS33AQ96AX1 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.32■□□□□ 0.52
VPS33AQ96AX1 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VPS33AQ96AX1 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
VPS33AQ96AX1 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
VPS33AQ96AX1 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.31■□□□□ 0.52
VPS33AQ96AX1 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.31■□□□□ 0.52
VPS33AQ96AX1 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.31■□□□□ 0.52
VPS33AQ96AX1 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VPS33AQ96AX1 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
VPS33AQ96AX1 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
VPS33AQ96AX1 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
VPS33AQ96AX1 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VPS33AQ96AX1 CROCCP5-201ENST00000436658 830 ntBASIC18.31■□□□□ 0.52
VPS33AQ96AX1 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
VPS33AQ96AX1 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.31■□□□□ 0.52
VPS33AQ96AX1 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.31■□□□□ 0.52
VPS33AQ96AX1 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
VPS33AQ96AX1 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.31■□□□□ 0.52
VPS33AQ96AX1 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VPS33AQ96AX1 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.31■□□□□ 0.52
VPS33AQ96AX1 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.31■□□□□ 0.52
VPS33AQ96AX1 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VPS33AQ96AX1 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
VPS33AQ96AX1 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VPS33AQ96AX1 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VPS33AQ96AX1 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.31■□□□□ 0.52
VPS33AQ96AX1 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VPS33AQ96AX1 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
VPS33AQ96AX1 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
VPS33AQ96AX1 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VPS33AQ96AX1 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VPS33AQ96AX1 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.3■□□□□ 0.52
VPS33AQ96AX1 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VPS33AQ96AX1 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
VPS33AQ96AX1 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VPS33AQ96AX1 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
VPS33AQ96AX1 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VPS33AQ96AX1 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VPS33AQ96AX1 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
VPS33AQ96AX1 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.3■□□□□ 0.52
VPS33AQ96AX1 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
VPS33AQ96AX1 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
VPS33AQ96AX1 YBX1P10-201ENST00000444752 975 ntBASIC18.3■□□□□ 0.52
VPS33AQ96AX1 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.3■□□□□ 0.52
VPS33AQ96AX1 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.3■□□□□ 0.52
VPS33AQ96AX1 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.3■□□□□ 0.52
VPS33AQ96AX1 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.3■□□□□ 0.52
VPS33AQ96AX1 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
VPS33AQ96AX1 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VPS33AQ96AX1 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.3■□□□□ 0.52
VPS33AQ96AX1 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VPS33AQ96AX1 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VPS33AQ96AX1 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.3■□□□□ 0.52
VPS33AQ96AX1 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VPS33AQ96AX1 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
VPS33AQ96AX1 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VPS33AQ96AX1 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms