Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.49■□□□□ 0.55
NCLNQ969V3 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.49■□□□□ 0.55
NCLNQ969V3 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.49■□□□□ 0.55
NCLNQ969V3 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCLNQ969V3 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
NCLNQ969V3 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NCLNQ969V3 AL121829.2-201ENST00000620908 328 ntBASIC18.49■□□□□ 0.55
NCLNQ969V3 AL121906.2-201ENST00000621597 723 ntBASIC18.49■□□□□ 0.55
NCLNQ969V3 AL359736.2-201ENST00000621992 437 ntBASIC18.49■□□□□ 0.55
NCLNQ969V3 FAM197Y4-202ENST00000622692 608 ntBASIC18.49■□□□□ 0.55
NCLNQ969V3 AL023875.1-201ENST00000640777 796 ntBASIC18.49■□□□□ 0.55
NCLNQ969V3 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.49■□□□□ 0.55
NCLNQ969V3 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCLNQ969V3 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.49■□□□□ 0.55
NCLNQ969V3 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCLNQ969V3 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
NCLNQ969V3 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCLNQ969V3 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
NCLNQ969V3 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NCLNQ969V3 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NCLNQ969V3 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NCLNQ969V3 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCLNQ969V3 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.49■□□□□ 0.55
NCLNQ969V3 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCLNQ969V3 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCLNQ969V3 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.49■□□□□ 0.55
NCLNQ969V3 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NCLNQ969V3 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
NCLNQ969V3 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCLNQ969V3 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.48■□□□□ 0.55
NCLNQ969V3 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NCLNQ969V3 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCLNQ969V3 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NCLNQ969V3 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NCLNQ969V3 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCLNQ969V3 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCLNQ969V3 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
NCLNQ969V3 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCLNQ969V3 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
NCLNQ969V3 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.48■□□□□ 0.55
NCLNQ969V3 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.48■□□□□ 0.55
NCLNQ969V3 PRKY-204ENST00000533551 1019 ntBASIC18.48■□□□□ 0.55
NCLNQ969V3 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.48■□□□□ 0.55
NCLNQ969V3 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.48■□□□□ 0.55
NCLNQ969V3 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.48■□□□□ 0.55
NCLNQ969V3 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCLNQ969V3 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NCLNQ969V3 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCLNQ969V3 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NCLNQ969V3 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
NCLNQ969V3 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCLNQ969V3 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NCLNQ969V3 PHGDH-210ENST00000641115 1638 ntBASIC18.48■□□□□ 0.55
NCLNQ969V3 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
NCLNQ969V3 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.48■□□□□ 0.55
NCLNQ969V3 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCLNQ969V3 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.48■□□□□ 0.55
NCLNQ969V3 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
NCLNQ969V3 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
NCLNQ969V3 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
NCLNQ969V3 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
NCLNQ969V3 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCLNQ969V3 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
NCLNQ969V3 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NCLNQ969V3 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NCLNQ969V3 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NCLNQ969V3 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.47■□□□□ 0.55
NCLNQ969V3 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NCLNQ969V3 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NCLNQ969V3 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
NCLNQ969V3 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NCLNQ969V3 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
NCLNQ969V3 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
NCLNQ969V3 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NCLNQ969V3 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NCLNQ969V3 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NCLNQ969V3 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.47■□□□□ 0.55
NCLNQ969V3 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.47■□□□□ 0.55
NCLNQ969V3 AC239809.2-201ENST00000415381 517 ntBASIC18.47■□□□□ 0.55
NCLNQ969V3 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.47■□□□□ 0.55
NCLNQ969V3 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.47■□□□□ 0.55
NCLNQ969V3 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.47■□□□□ 0.55
NCLNQ969V3 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
NCLNQ969V3 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.47■□□□□ 0.55
NCLNQ969V3 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.47■□□□□ 0.55
NCLNQ969V3 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NCLNQ969V3 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
NCLNQ969V3 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
NCLNQ969V3 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NCLNQ969V3 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.47■□□□□ 0.55
NCLNQ969V3 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.46■□□□□ 0.55
NCLNQ969V3 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NCLNQ969V3 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.46■□□□□ 0.55
NCLNQ969V3 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
NCLNQ969V3 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
NCLNQ969V3 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
NCLNQ969V3 NEFHP1-201ENST00000412845 2629 ntBASIC18.46■□□□□ 0.55
NCLNQ969V3 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NCLNQ969V3 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NCLNQ969V3 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms