Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SCAMP4Q969E2 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SCAMP4Q969E2 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SCAMP4Q969E2 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.96■□□□□ 0.63
SCAMP4Q969E2 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SCAMP4Q969E2 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SCAMP4Q969E2 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.96■□□□□ 0.63
SCAMP4Q969E2 AC141586.3-201ENST00000562166 1838 ntBASIC18.95■□□□□ 0.62
SCAMP4Q969E2 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
SCAMP4Q969E2 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SCAMP4Q969E2 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SCAMP4Q969E2 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SCAMP4Q969E2 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.95■□□□□ 0.62
SCAMP4Q969E2 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.95■□□□□ 0.62
SCAMP4Q969E2 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
SCAMP4Q969E2 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SCAMP4Q969E2 TSPY14P-201ENST00000303979 915 ntBASIC18.95■□□□□ 0.62
SCAMP4Q969E2 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.95■□□□□ 0.62
SCAMP4Q969E2 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.95■□□□□ 0.62
SCAMP4Q969E2 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SCAMP4Q969E2 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.95■□□□□ 0.62
SCAMP4Q969E2 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.95■□□□□ 0.62
SCAMP4Q969E2 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SCAMP4Q969E2 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.95■□□□□ 0.62
SCAMP4Q969E2 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.95■□□□□ 0.62
SCAMP4Q969E2 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SCAMP4Q969E2 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SCAMP4Q969E2 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SCAMP4Q969E2 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SCAMP4Q969E2 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SCAMP4Q969E2 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.94■□□□□ 0.62
SCAMP4Q969E2 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.94■□□□□ 0.62
SCAMP4Q969E2 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SCAMP4Q969E2 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SCAMP4Q969E2 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SCAMP4Q969E2 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SCAMP4Q969E2 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SCAMP4Q969E2 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SCAMP4Q969E2 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.94■□□□□ 0.62
SCAMP4Q969E2 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SCAMP4Q969E2 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SCAMP4Q969E2 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.94■□□□□ 0.62
SCAMP4Q969E2 EGLN1P1-201ENST00000531623 762 ntBASIC18.94■□□□□ 0.62
SCAMP4Q969E2 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.94■□□□□ 0.62
SCAMP4Q969E2 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SCAMP4Q969E2 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SCAMP4Q969E2 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SCAMP4Q969E2 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SCAMP4Q969E2 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.94■□□□□ 0.62
SCAMP4Q969E2 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SCAMP4Q969E2 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SCAMP4Q969E2 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
SCAMP4Q969E2 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SCAMP4Q969E2 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SCAMP4Q969E2 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.93■□□□□ 0.62
SCAMP4Q969E2 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SCAMP4Q969E2 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SCAMP4Q969E2 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SCAMP4Q969E2 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SCAMP4Q969E2 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SCAMP4Q969E2 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SCAMP4Q969E2 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SCAMP4Q969E2 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.93■□□□□ 0.62
SCAMP4Q969E2 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.93■□□□□ 0.62
SCAMP4Q969E2 ECEL1P2-202ENST00000465689 757 ntBASIC18.93■□□□□ 0.62
SCAMP4Q969E2 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.93■□□□□ 0.62
SCAMP4Q969E2 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SCAMP4Q969E2 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.93■□□□□ 0.62
SCAMP4Q969E2 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.93■□□□□ 0.62
SCAMP4Q969E2 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SCAMP4Q969E2 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.93■□□□□ 0.62
SCAMP4Q969E2 KRT18P22-201ENST00000402024 1347 ntBASIC18.93■□□□□ 0.62
SCAMP4Q969E2 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
SCAMP4Q969E2 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SCAMP4Q969E2 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.93■□□□□ 0.62
SCAMP4Q969E2 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.93■□□□□ 0.62
SCAMP4Q969E2 IRX1P1-201ENST00000438849 1838 ntBASIC18.93■□□□□ 0.62
SCAMP4Q969E2 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SCAMP4Q969E2 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
SCAMP4Q969E2 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.92■□□□□ 0.62
SCAMP4Q969E2 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.92■□□□□ 0.62
SCAMP4Q969E2 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SCAMP4Q969E2 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SCAMP4Q969E2 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SCAMP4Q969E2 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SCAMP4Q969E2 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.92■□□□□ 0.62
SCAMP4Q969E2 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SCAMP4Q969E2 SLC25A1P2-201ENST00000430693 912 ntBASIC18.92■□□□□ 0.62
SCAMP4Q969E2 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.92■□□□□ 0.62
SCAMP4Q969E2 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.92■□□□□ 0.62
SCAMP4Q969E2 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.92■□□□□ 0.62
SCAMP4Q969E2 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.92■□□□□ 0.62
SCAMP4Q969E2 AL023803.3-201ENST00000615559 522 ntBASIC18.92■□□□□ 0.62
SCAMP4Q969E2 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SCAMP4Q969E2 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SCAMP4Q969E2 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.92■□□□□ 0.62
SCAMP4Q969E2 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SCAMP4Q969E2 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SCAMP4Q969E2 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SCAMP4Q969E2 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms