Protein–RNA interactions for Protein: Q92629

SGCD, Delta-sarcoglycan, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCDQ92629 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC17.43■□□□□ 0.38
SGCDQ92629 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC17.43■□□□□ 0.38
SGCDQ92629 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SGCDQ92629 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SGCDQ92629 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SGCDQ92629 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.43■□□□□ 0.38
SGCDQ92629 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SGCDQ92629 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SGCDQ92629 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SGCDQ92629 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SGCDQ92629 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SGCDQ92629 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SGCDQ92629 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SGCDQ92629 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SGCDQ92629 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SGCDQ92629 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SGCDQ92629 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SGCDQ92629 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SGCDQ92629 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SGCDQ92629 AL162430.1-201ENST00000480705 870 ntBASIC17.42■□□□□ 0.38
SGCDQ92629 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.42■□□□□ 0.38
SGCDQ92629 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SGCDQ92629 AC087623.3-201ENST00000607047 1098 ntBASIC17.42■□□□□ 0.38
SGCDQ92629 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SGCDQ92629 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.42■□□□□ 0.38
SGCDQ92629 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.42■□□□□ 0.38
SGCDQ92629 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SGCDQ92629 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SGCDQ92629 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SGCDQ92629 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.42■□□□□ 0.38
SGCDQ92629 AC126763.1-201ENST00000552015 2118 ntBASIC17.42■□□□□ 0.38
SGCDQ92629 LINC00896-202ENST00000609602 2128 ntBASIC17.42■□□□□ 0.38
SGCDQ92629 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SGCDQ92629 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SGCDQ92629 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SGCDQ92629 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
SGCDQ92629 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.42■□□□□ 0.38
SGCDQ92629 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SGCDQ92629 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SGCDQ92629 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SGCDQ92629 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SGCDQ92629 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
SGCDQ92629 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SGCDQ92629 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SGCDQ92629 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SGCDQ92629 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.41■□□□□ 0.38
SGCDQ92629 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SGCDQ92629 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SGCDQ92629 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SGCDQ92629 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SGCDQ92629 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SGCDQ92629 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SGCDQ92629 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SGCDQ92629 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.41■□□□□ 0.38
SGCDQ92629 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SGCDQ92629 PLD4-205ENST00000553861 667 ntTSL 2 BASIC17.41■□□□□ 0.38
SGCDQ92629 AC016405.3-201ENST00000607710 860 ntBASIC17.41■□□□□ 0.38
SGCDQ92629 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SGCDQ92629 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SGCDQ92629 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SGCDQ92629 AC018553.1-201ENST00000616682 1458 ntBASIC17.41■□□□□ 0.38
SGCDQ92629 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SGCDQ92629 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.41■□□□□ 0.38
SGCDQ92629 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SGCDQ92629 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SGCDQ92629 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.41■□□□□ 0.38
SGCDQ92629 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SGCDQ92629 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.41■□□□□ 0.38
SGCDQ92629 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SGCDQ92629 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SGCDQ92629 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SGCDQ92629 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SGCDQ92629 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SGCDQ92629 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SGCDQ92629 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SGCDQ92629 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SGCDQ92629 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SGCDQ92629 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SGCDQ92629 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SGCDQ92629 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.4■□□□□ 0.38
SGCDQ92629 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
SGCDQ92629 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SGCDQ92629 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.4■□□□□ 0.38
SGCDQ92629 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SGCDQ92629 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SGCDQ92629 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SGCDQ92629 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SGCDQ92629 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SGCDQ92629 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SGCDQ92629 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
SGCDQ92629 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.4■□□□□ 0.38
SGCDQ92629 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SGCDQ92629 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.4■□□□□ 0.38
SGCDQ92629 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SGCDQ92629 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
SGCDQ92629 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SGCDQ92629 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SGCDQ92629 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.4■□□□□ 0.38
SGCDQ92629 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SGCDQ92629 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms