Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TM9SF4Q92544 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
TM9SF4Q92544 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.99■□□□□ 0.47
TM9SF4Q92544 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.99■□□□□ 0.47
TM9SF4Q92544 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.99■□□□□ 0.47
TM9SF4Q92544 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TM9SF4Q92544 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
TM9SF4Q92544 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TM9SF4Q92544 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.99■□□□□ 0.47
TM9SF4Q92544 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TM9SF4Q92544 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
TM9SF4Q92544 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TM9SF4Q92544 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TM9SF4Q92544 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TM9SF4Q92544 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.99■□□□□ 0.47
TM9SF4Q92544 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TM9SF4Q92544 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TM9SF4Q92544 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
TM9SF4Q92544 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TM9SF4Q92544 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.98■□□□□ 0.47
TM9SF4Q92544 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TM9SF4Q92544 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.98■□□□□ 0.47
TM9SF4Q92544 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
TM9SF4Q92544 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
TM9SF4Q92544 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.98■□□□□ 0.47
TM9SF4Q92544 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
TM9SF4Q92544 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TM9SF4Q92544 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TM9SF4Q92544 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
TM9SF4Q92544 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
TM9SF4Q92544 MESTP1-201ENST00000404287 994 ntBASIC17.98■□□□□ 0.47
TM9SF4Q92544 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TM9SF4Q92544 DUX4L26-201ENST00000489078 1255 ntBASIC17.98■□□□□ 0.47
TM9SF4Q92544 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.98■□□□□ 0.47
TM9SF4Q92544 SLC25A1P4-201ENST00000567977 778 ntBASIC17.98■□□□□ 0.47
TM9SF4Q92544 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TM9SF4Q92544 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
TM9SF4Q92544 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.98■□□□□ 0.47
TM9SF4Q92544 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
TM9SF4Q92544 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TM9SF4Q92544 TREX1-205ENST00000625293 1783 ntBASIC17.98■□□□□ 0.47
TM9SF4Q92544 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.98■□□□□ 0.47
TM9SF4Q92544 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
TM9SF4Q92544 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TM9SF4Q92544 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.98■□□□□ 0.47
TM9SF4Q92544 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TM9SF4Q92544 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TM9SF4Q92544 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.98■□□□□ 0.47
TM9SF4Q92544 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TM9SF4Q92544 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TM9SF4Q92544 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TM9SF4Q92544 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.97■□□□□ 0.47
TM9SF4Q92544 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.97■□□□□ 0.47
TM9SF4Q92544 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.97■□□□□ 0.47
TM9SF4Q92544 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TM9SF4Q92544 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TM9SF4Q92544 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TM9SF4Q92544 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.97■□□□□ 0.47
TM9SF4Q92544 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TM9SF4Q92544 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.97■□□□□ 0.47
TM9SF4Q92544 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.97■□□□□ 0.47
TM9SF4Q92544 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TM9SF4Q92544 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
TM9SF4Q92544 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.97■□□□□ 0.47
TM9SF4Q92544 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TM9SF4Q92544 AC087388.1-201ENST00000571370 1112 ntBASIC17.97■□□□□ 0.47
TM9SF4Q92544 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.97■□□□□ 0.47
TM9SF4Q92544 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TM9SF4Q92544 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.97■□□□□ 0.47
TM9SF4Q92544 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TM9SF4Q92544 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TM9SF4Q92544 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TM9SF4Q92544 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TM9SF4Q92544 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TM9SF4Q92544 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.97■□□□□ 0.47
TM9SF4Q92544 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TM9SF4Q92544 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
TM9SF4Q92544 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TM9SF4Q92544 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.97■□□□□ 0.47
TM9SF4Q92544 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TM9SF4Q92544 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TM9SF4Q92544 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TM9SF4Q92544 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.96■□□□□ 0.47
TM9SF4Q92544 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
TM9SF4Q92544 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TM9SF4Q92544 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.96■□□□□ 0.47
TM9SF4Q92544 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
TM9SF4Q92544 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TM9SF4Q92544 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TM9SF4Q92544 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TM9SF4Q92544 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TM9SF4Q92544 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TM9SF4Q92544 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.96■□□□□ 0.47
TM9SF4Q92544 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.96■□□□□ 0.47
TM9SF4Q92544 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.96■□□□□ 0.47
TM9SF4Q92544 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.96■□□□□ 0.47
TM9SF4Q92544 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.96■□□□□ 0.47
TM9SF4Q92544 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
TM9SF4Q92544 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TM9SF4Q92544 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms