Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.96■□□□□ 0.63
CKAP2Q8WWK9 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CKAP2Q8WWK9 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CKAP2Q8WWK9 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CKAP2Q8WWK9 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CKAP2Q8WWK9 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CKAP2Q8WWK9 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CKAP2Q8WWK9 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CKAP2Q8WWK9 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CKAP2Q8WWK9 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CKAP2Q8WWK9 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CKAP2Q8WWK9 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
CKAP2Q8WWK9 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CKAP2Q8WWK9 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
CKAP2Q8WWK9 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CKAP2Q8WWK9 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.95■□□□□ 0.62
CKAP2Q8WWK9 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CKAP2Q8WWK9 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CKAP2Q8WWK9 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CKAP2Q8WWK9 AL355472.2-201ENST00000422958 438 ntBASIC18.95■□□□□ 0.62
CKAP2Q8WWK9 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.95■□□□□ 0.62
CKAP2Q8WWK9 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.95■□□□□ 0.62
CKAP2Q8WWK9 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.95■□□□□ 0.62
CKAP2Q8WWK9 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CKAP2Q8WWK9 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CKAP2Q8WWK9 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CKAP2Q8WWK9 LINC00896-202ENST00000609602 2128 ntBASIC18.95■□□□□ 0.62
CKAP2Q8WWK9 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CKAP2Q8WWK9 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.95■□□□□ 0.62
CKAP2Q8WWK9 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.95■□□□□ 0.62
CKAP2Q8WWK9 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.95■□□□□ 0.62
CKAP2Q8WWK9 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CKAP2Q8WWK9 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CKAP2Q8WWK9 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CKAP2Q8WWK9 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CKAP2Q8WWK9 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.94■□□□□ 0.62
CKAP2Q8WWK9 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CKAP2Q8WWK9 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CKAP2Q8WWK9 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CKAP2Q8WWK9 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.94■□□□□ 0.62
CKAP2Q8WWK9 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.94■□□□□ 0.62
CKAP2Q8WWK9 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CKAP2Q8WWK9 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.94■□□□□ 0.62
CKAP2Q8WWK9 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.94■□□□□ 0.62
CKAP2Q8WWK9 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CKAP2Q8WWK9 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.94■□□□□ 0.62
CKAP2Q8WWK9 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CKAP2Q8WWK9 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.94■□□□□ 0.62
CKAP2Q8WWK9 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.94■□□□□ 0.62
CKAP2Q8WWK9 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CKAP2Q8WWK9 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.94■□□□□ 0.62
CKAP2Q8WWK9 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CKAP2Q8WWK9 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CKAP2Q8WWK9 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.94■□□□□ 0.62
CKAP2Q8WWK9 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CKAP2Q8WWK9 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.94■□□□□ 0.62
CKAP2Q8WWK9 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
CKAP2Q8WWK9 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CKAP2Q8WWK9 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
CKAP2Q8WWK9 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CKAP2Q8WWK9 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CKAP2Q8WWK9 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CKAP2Q8WWK9 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CKAP2Q8WWK9 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.93■□□□□ 0.62
CKAP2Q8WWK9 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.93■□□□□ 0.62
CKAP2Q8WWK9 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CKAP2Q8WWK9 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CKAP2Q8WWK9 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CKAP2Q8WWK9 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.93■□□□□ 0.62
CKAP2Q8WWK9 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CKAP2Q8WWK9 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CKAP2Q8WWK9 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CKAP2Q8WWK9 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.93■□□□□ 0.62
CKAP2Q8WWK9 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.93■□□□□ 0.62
CKAP2Q8WWK9 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CKAP2Q8WWK9 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CKAP2Q8WWK9 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CKAP2Q8WWK9 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CKAP2Q8WWK9 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CKAP2Q8WWK9 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.93■□□□□ 0.62
CKAP2Q8WWK9 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.93■□□□□ 0.62
CKAP2Q8WWK9 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CKAP2Q8WWK9 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CKAP2Q8WWK9 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CKAP2Q8WWK9 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
CKAP2Q8WWK9 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CKAP2Q8WWK9 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CKAP2Q8WWK9 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CKAP2Q8WWK9 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CKAP2Q8WWK9 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.92■□□□□ 0.62
CKAP2Q8WWK9 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CKAP2Q8WWK9 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.92■□□□□ 0.62
CKAP2Q8WWK9 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CKAP2Q8WWK9 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CKAP2Q8WWK9 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.92■□□□□ 0.62
CKAP2Q8WWK9 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CKAP2Q8WWK9 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
CKAP2Q8WWK9 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
CKAP2Q8WWK9 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.92■□□□□ 0.62
CKAP2Q8WWK9 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms