Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC23.22■■□□□ 1.31
SNED1Q8TER0 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SNED1Q8TER0 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC23.22■■□□□ 1.31
SNED1Q8TER0 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SNED1Q8TER0 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC23.22■■□□□ 1.31
SNED1Q8TER0 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SNED1Q8TER0 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SNED1Q8TER0 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC23.22■■□□□ 1.31
SNED1Q8TER0 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
SNED1Q8TER0 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SNED1Q8TER0 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
SNED1Q8TER0 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
SNED1Q8TER0 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
SNED1Q8TER0 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC23.22■■□□□ 1.31
SNED1Q8TER0 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SNED1Q8TER0 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC23.22■■□□□ 1.31
SNED1Q8TER0 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
SNED1Q8TER0 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC23.22■■□□□ 1.31
SNED1Q8TER0 AL671883.3-201ENST00000603274 991 ntBASIC23.22■■□□□ 1.31
SNED1Q8TER0 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
SNED1Q8TER0 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC23.22■■□□□ 1.31
SNED1Q8TER0 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC23.22■■□□□ 1.31
SNED1Q8TER0 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SNED1Q8TER0 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SNED1Q8TER0 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SNED1Q8TER0 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SNED1Q8TER0 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SNED1Q8TER0 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SNED1Q8TER0 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC23.21■■□□□ 1.31
SNED1Q8TER0 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
SNED1Q8TER0 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC23.21■■□□□ 1.31
SNED1Q8TER0 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SNED1Q8TER0 MIR3180-5-201ENST00000583743 153 ntBASIC23.21■■□□□ 1.31
SNED1Q8TER0 AL136038.4-201ENST00000603606 1261 ntBASIC23.21■■□□□ 1.31
SNED1Q8TER0 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
SNED1Q8TER0 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SNED1Q8TER0 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
SNED1Q8TER0 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SNED1Q8TER0 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SNED1Q8TER0 ZNF815P-204ENST00000434898 1737 ntBASIC23.21■■□□□ 1.31
SNED1Q8TER0 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SNED1Q8TER0 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SNED1Q8TER0 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SNED1Q8TER0 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
SNED1Q8TER0 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.31
SNED1Q8TER0 AL157384.1-201ENST00000445995 2473 ntBASIC23.2■■□□□ 1.3
SNED1Q8TER0 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
SNED1Q8TER0 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
SNED1Q8TER0 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
SNED1Q8TER0 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC23.2■■□□□ 1.3
SNED1Q8TER0 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC23.2■■□□□ 1.3
SNED1Q8TER0 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC23.2■■□□□ 1.3
SNED1Q8TER0 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
SNED1Q8TER0 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC23.2■■□□□ 1.3
SNED1Q8TER0 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC23.2■■□□□ 1.3
SNED1Q8TER0 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
SNED1Q8TER0 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
SNED1Q8TER0 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SNED1Q8TER0 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SNED1Q8TER0 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC23.2■■□□□ 1.3
SNED1Q8TER0 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC23.2■■□□□ 1.3
SNED1Q8TER0 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SNED1Q8TER0 AL391807.1-203ENST00000604392 2365 ntBASIC23.2■■□□□ 1.3
SNED1Q8TER0 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC23.2■■□□□ 1.3
SNED1Q8TER0 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SNED1Q8TER0 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SNED1Q8TER0 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SNED1Q8TER0 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC23.19■■□□□ 1.3
SNED1Q8TER0 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SNED1Q8TER0 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
SNED1Q8TER0 AL022342.1-201ENST00000400363 863 ntBASIC23.19■■□□□ 1.3
SNED1Q8TER0 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
SNED1Q8TER0 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC23.19■■□□□ 1.3
SNED1Q8TER0 AL160237.2-201ENST00000556165 472 ntBASIC23.19■■□□□ 1.3
SNED1Q8TER0 MIR3917-201ENST00000580971 93 ntBASIC23.19■■□□□ 1.3
SNED1Q8TER0 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC23.19■■□□□ 1.3
SNED1Q8TER0 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SNED1Q8TER0 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
SNED1Q8TER0 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC23.19■■□□□ 1.3
SNED1Q8TER0 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SNED1Q8TER0 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
SNED1Q8TER0 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
SNED1Q8TER0 GOLGA6L5P-202ENST00000515341 1828 ntBASIC23.18■■□□□ 1.3
SNED1Q8TER0 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SNED1Q8TER0 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC23.18■■□□□ 1.3
SNED1Q8TER0 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC23.18■■□□□ 1.3
SNED1Q8TER0 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
SNED1Q8TER0 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC23.18■■□□□ 1.3
SNED1Q8TER0 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC23.18■■□□□ 1.3
SNED1Q8TER0 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SNED1Q8TER0 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC23.18■■□□□ 1.3
SNED1Q8TER0 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
SNED1Q8TER0 AC006538.3-201ENST00000612495 578 ntBASIC23.18■■□□□ 1.3
SNED1Q8TER0 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC23.18■■□□□ 1.3
SNED1Q8TER0 SDHAP1-207ENST00000440850 2000 ntBASIC23.18■■□□□ 1.3
SNED1Q8TER0 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
SNED1Q8TER0 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SNED1Q8TER0 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SNED1Q8TER0 USP48-205ENST00000421625 2818 ntTSL 2 BASIC23.18■■□□□ 1.3
SNED1Q8TER0 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms