Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.79■□□□□ 0.76
SH3RF2Q8TEC5 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.79■□□□□ 0.76
SH3RF2Q8TEC5 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SH3RF2Q8TEC5 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SH3RF2Q8TEC5 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SH3RF2Q8TEC5 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SH3RF2Q8TEC5 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
SH3RF2Q8TEC5 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SH3RF2Q8TEC5 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.79■□□□□ 0.76
SH3RF2Q8TEC5 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SH3RF2Q8TEC5 AC092647.4-201ENST00000457211 535 ntBASIC19.79■□□□□ 0.76
SH3RF2Q8TEC5 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SH3RF2Q8TEC5 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.79■□□□□ 0.76
SH3RF2Q8TEC5 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.79■□□□□ 0.76
SH3RF2Q8TEC5 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.79■□□□□ 0.76
SH3RF2Q8TEC5 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SH3RF2Q8TEC5 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SH3RF2Q8TEC5 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
SH3RF2Q8TEC5 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SH3RF2Q8TEC5 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SH3RF2Q8TEC5 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SH3RF2Q8TEC5 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SH3RF2Q8TEC5 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.79■□□□□ 0.76
SH3RF2Q8TEC5 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SH3RF2Q8TEC5 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SH3RF2Q8TEC5 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SH3RF2Q8TEC5 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
SH3RF2Q8TEC5 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SH3RF2Q8TEC5 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SH3RF2Q8TEC5 SDHAP1-207ENST00000440850 2000 ntBASIC19.78■□□□□ 0.76
SH3RF2Q8TEC5 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SH3RF2Q8TEC5 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SH3RF2Q8TEC5 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SH3RF2Q8TEC5 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SH3RF2Q8TEC5 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SH3RF2Q8TEC5 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.78■□□□□ 0.76
SH3RF2Q8TEC5 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SH3RF2Q8TEC5 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.78■□□□□ 0.76
SH3RF2Q8TEC5 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.78■□□□□ 0.76
SH3RF2Q8TEC5 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
SH3RF2Q8TEC5 AL023973.1-201ENST00000624619 620 ntBASIC19.78■□□□□ 0.76
SH3RF2Q8TEC5 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.78■□□□□ 0.76
SH3RF2Q8TEC5 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.78■□□□□ 0.76
SH3RF2Q8TEC5 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.78■□□□□ 0.76
SH3RF2Q8TEC5 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.78■□□□□ 0.76
SH3RF2Q8TEC5 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.78■□□□□ 0.76
SH3RF2Q8TEC5 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.78■□□□□ 0.76
SH3RF2Q8TEC5 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SH3RF2Q8TEC5 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SH3RF2Q8TEC5 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SH3RF2Q8TEC5 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.77■□□□□ 0.76
SH3RF2Q8TEC5 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SH3RF2Q8TEC5 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SH3RF2Q8TEC5 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SH3RF2Q8TEC5 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.77■□□□□ 0.76
SH3RF2Q8TEC5 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SH3RF2Q8TEC5 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SH3RF2Q8TEC5 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SH3RF2Q8TEC5 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SH3RF2Q8TEC5 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SH3RF2Q8TEC5 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SH3RF2Q8TEC5 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SH3RF2Q8TEC5 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.77■□□□□ 0.76
SH3RF2Q8TEC5 TSPY23P-201ENST00000440136 739 ntBASIC19.77■□□□□ 0.76
SH3RF2Q8TEC5 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SH3RF2Q8TEC5 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.77■□□□□ 0.76
SH3RF2Q8TEC5 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SH3RF2Q8TEC5 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.77■□□□□ 0.76
SH3RF2Q8TEC5 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SH3RF2Q8TEC5 AC140113.3-201ENST00000605663 199 ntBASIC19.77■□□□□ 0.76
SH3RF2Q8TEC5 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SH3RF2Q8TEC5 AL031432.5-201ENST00000641059 760 ntBASIC19.77■□□□□ 0.76
SH3RF2Q8TEC5 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SH3RF2Q8TEC5 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SH3RF2Q8TEC5 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SH3RF2Q8TEC5 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SH3RF2Q8TEC5 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SH3RF2Q8TEC5 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.77■□□□□ 0.75
SH3RF2Q8TEC5 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SH3RF2Q8TEC5 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
SH3RF2Q8TEC5 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.76■□□□□ 0.75
SH3RF2Q8TEC5 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SH3RF2Q8TEC5 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
SH3RF2Q8TEC5 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SH3RF2Q8TEC5 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
SH3RF2Q8TEC5 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SH3RF2Q8TEC5 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
SH3RF2Q8TEC5 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
SH3RF2Q8TEC5 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SH3RF2Q8TEC5 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SH3RF2Q8TEC5 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SH3RF2Q8TEC5 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.76■□□□□ 0.75
SH3RF2Q8TEC5 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SH3RF2Q8TEC5 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SH3RF2Q8TEC5 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.76■□□□□ 0.75
SH3RF2Q8TEC5 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SH3RF2Q8TEC5 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.76■□□□□ 0.75
SH3RF2Q8TEC5 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SH3RF2Q8TEC5 MYC-208ENST00000641036 567 ntBASIC19.76■□□□□ 0.75
SH3RF2Q8TEC5 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms