Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC092647.4-201ENST00000457211 535 ntBASIC20.03■□□□□ 0.8
SHKBP1Q8TBC3 AL512604.3-201ENST00000569583 964 ntBASIC20.03■□□□□ 0.8
SHKBP1Q8TBC3 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.03■□□□□ 0.8
SHKBP1Q8TBC3 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SHKBP1Q8TBC3 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
SHKBP1Q8TBC3 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
SHKBP1Q8TBC3 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHKBP1Q8TBC3 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
SHKBP1Q8TBC3 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHKBP1Q8TBC3 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.03■□□□□ 0.8
SHKBP1Q8TBC3 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SHKBP1Q8TBC3 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SHKBP1Q8TBC3 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SHKBP1Q8TBC3 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SHKBP1Q8TBC3 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SHKBP1Q8TBC3 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SHKBP1Q8TBC3 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SHKBP1Q8TBC3 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.02■□□□□ 0.8
SHKBP1Q8TBC3 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SHKBP1Q8TBC3 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.02■□□□□ 0.8
SHKBP1Q8TBC3 PRSS44-201ENST00000515154 1146 ntBASIC20.02■□□□□ 0.8
SHKBP1Q8TBC3 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.02■□□□□ 0.8
SHKBP1Q8TBC3 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.02■□□□□ 0.8
SHKBP1Q8TBC3 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.02■□□□□ 0.8
SHKBP1Q8TBC3 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.02■□□□□ 0.8
SHKBP1Q8TBC3 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SHKBP1Q8TBC3 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.02■□□□□ 0.8
SHKBP1Q8TBC3 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SHKBP1Q8TBC3 AL023973.1-201ENST00000624619 620 ntBASIC20.02■□□□□ 0.8
SHKBP1Q8TBC3 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SHKBP1Q8TBC3 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SHKBP1Q8TBC3 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SHKBP1Q8TBC3 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SHKBP1Q8TBC3 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
SHKBP1Q8TBC3 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SHKBP1Q8TBC3 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.02■□□□□ 0.79
SHKBP1Q8TBC3 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
SHKBP1Q8TBC3 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
SHKBP1Q8TBC3 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.02■□□□□ 0.79
SHKBP1Q8TBC3 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.02■□□□□ 0.79
SHKBP1Q8TBC3 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SHKBP1Q8TBC3 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SHKBP1Q8TBC3 KRT8P45-201ENST00000414328 1447 ntBASIC20.02■□□□□ 0.79
SHKBP1Q8TBC3 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
SHKBP1Q8TBC3 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.01■□□□□ 0.79
SHKBP1Q8TBC3 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
SHKBP1Q8TBC3 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SHKBP1Q8TBC3 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHKBP1Q8TBC3 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.01■□□□□ 0.79
SHKBP1Q8TBC3 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SHKBP1Q8TBC3 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHKBP1Q8TBC3 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC20.01■□□□□ 0.79
SHKBP1Q8TBC3 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.01■□□□□ 0.79
SHKBP1Q8TBC3 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SHKBP1Q8TBC3 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SHKBP1Q8TBC3 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.01■□□□□ 0.79
SHKBP1Q8TBC3 AL441883.1-201ENST00000566170 1045 ntBASIC20.01■□□□□ 0.79
SHKBP1Q8TBC3 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SHKBP1Q8TBC3 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.01■□□□□ 0.79
SHKBP1Q8TBC3 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHKBP1Q8TBC3 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHKBP1Q8TBC3 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHKBP1Q8TBC3 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHKBP1Q8TBC3 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.01■□□□□ 0.79
SHKBP1Q8TBC3 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
SHKBP1Q8TBC3 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
SHKBP1Q8TBC3 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHKBP1Q8TBC3 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
SHKBP1Q8TBC3 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SHKBP1Q8TBC3 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.01■□□□□ 0.79
SHKBP1Q8TBC3 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20■□□□□ 0.79
SHKBP1Q8TBC3 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
SHKBP1Q8TBC3 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SHKBP1Q8TBC3 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SHKBP1Q8TBC3 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
SHKBP1Q8TBC3 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SHKBP1Q8TBC3 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SHKBP1Q8TBC3 AC091076.1-201ENST00000610741 619 ntBASIC20■□□□□ 0.79
SHKBP1Q8TBC3 AL031432.5-201ENST00000641059 760 ntBASIC20■□□□□ 0.79
SHKBP1Q8TBC3 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20■□□□□ 0.79
SHKBP1Q8TBC3 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
SHKBP1Q8TBC3 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SHKBP1Q8TBC3 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SHKBP1Q8TBC3 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHKBP1Q8TBC3 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.99■□□□□ 0.79
SHKBP1Q8TBC3 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.99■□□□□ 0.79
SHKBP1Q8TBC3 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHKBP1Q8TBC3 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHKBP1Q8TBC3 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHKBP1Q8TBC3 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.99■□□□□ 0.79
SHKBP1Q8TBC3 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHKBP1Q8TBC3 UPK3BP1-201ENST00000428678 509 ntBASIC19.99■□□□□ 0.79
SHKBP1Q8TBC3 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHKBP1Q8TBC3 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.99■□□□□ 0.79
SHKBP1Q8TBC3 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.99■□□□□ 0.79
SHKBP1Q8TBC3 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHKBP1Q8TBC3 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.99■□□□□ 0.79
SHKBP1Q8TBC3 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHKBP1Q8TBC3 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.99■□□□□ 0.79
SHKBP1Q8TBC3 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms