Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.74■□□□□ 0.59
HMGCLL1Q8TB92 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
HMGCLL1Q8TB92 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCLL1Q8TB92 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCLL1Q8TB92 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCLL1Q8TB92 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCLL1Q8TB92 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCLL1Q8TB92 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.74■□□□□ 0.59
HMGCLL1Q8TB92 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
HMGCLL1Q8TB92 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
HMGCLL1Q8TB92 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCLL1Q8TB92 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCLL1Q8TB92 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.73■□□□□ 0.59
HMGCLL1Q8TB92 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMGCLL1Q8TB92 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
HMGCLL1Q8TB92 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMGCLL1Q8TB92 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMGCLL1Q8TB92 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
HMGCLL1Q8TB92 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMGCLL1Q8TB92 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMGCLL1Q8TB92 RPS2P4-201ENST00000476944 856 ntBASIC18.73■□□□□ 0.59
HMGCLL1Q8TB92 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.73■□□□□ 0.59
HMGCLL1Q8TB92 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
HMGCLL1Q8TB92 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.73■□□□□ 0.59
HMGCLL1Q8TB92 AC113410.3-201ENST00000623366 203 ntBASIC18.73■□□□□ 0.59
HMGCLL1Q8TB92 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
HMGCLL1Q8TB92 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
HMGCLL1Q8TB92 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.73■□□□□ 0.59
HMGCLL1Q8TB92 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMGCLL1Q8TB92 AC104417.2-201ENST00000562989 1793 ntBASIC18.73■□□□□ 0.59
HMGCLL1Q8TB92 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
HMGCLL1Q8TB92 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.73■□□□□ 0.59
HMGCLL1Q8TB92 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.73■□□□□ 0.59
HMGCLL1Q8TB92 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
HMGCLL1Q8TB92 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
HMGCLL1Q8TB92 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.72■□□□□ 0.59
HMGCLL1Q8TB92 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HMGCLL1Q8TB92 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.72■□□□□ 0.59
HMGCLL1Q8TB92 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMGCLL1Q8TB92 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
HMGCLL1Q8TB92 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.72■□□□□ 0.59
HMGCLL1Q8TB92 AC004980.1-204ENST00000429707 299 ntBASIC18.72■□□□□ 0.59
HMGCLL1Q8TB92 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMGCLL1Q8TB92 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.72■□□□□ 0.59
HMGCLL1Q8TB92 AL160286.2-201ENST00000567150 934 ntBASIC18.72■□□□□ 0.59
HMGCLL1Q8TB92 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HMGCLL1Q8TB92 CD177P1-201ENST00000606252 935 ntBASIC18.72■□□□□ 0.59
HMGCLL1Q8TB92 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMGCLL1Q8TB92 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HMGCLL1Q8TB92 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMGCLL1Q8TB92 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMGCLL1Q8TB92 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.72■□□□□ 0.59
HMGCLL1Q8TB92 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.72■□□□□ 0.59
HMGCLL1Q8TB92 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.72■□□□□ 0.59
HMGCLL1Q8TB92 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMGCLL1Q8TB92 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMGCLL1Q8TB92 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
HMGCLL1Q8TB92 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.71■□□□□ 0.59
HMGCLL1Q8TB92 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
HMGCLL1Q8TB92 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HMGCLL1Q8TB92 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HMGCLL1Q8TB92 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HMGCLL1Q8TB92 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
HMGCLL1Q8TB92 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HMGCLL1Q8TB92 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
HMGCLL1Q8TB92 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HMGCLL1Q8TB92 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
HMGCLL1Q8TB92 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
HMGCLL1Q8TB92 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.71■□□□□ 0.59
HMGCLL1Q8TB92 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.71■□□□□ 0.59
HMGCLL1Q8TB92 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.71■□□□□ 0.59
HMGCLL1Q8TB92 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.71■□□□□ 0.59
HMGCLL1Q8TB92 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.71■□□□□ 0.59
HMGCLL1Q8TB92 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.71■□□□□ 0.59
HMGCLL1Q8TB92 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.71■□□□□ 0.59
HMGCLL1Q8TB92 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.71■□□□□ 0.59
HMGCLL1Q8TB92 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.71■□□□□ 0.59
HMGCLL1Q8TB92 AC131212.4-201ENST00000623606 975 ntBASIC18.71■□□□□ 0.59
HMGCLL1Q8TB92 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.71■□□□□ 0.59
HMGCLL1Q8TB92 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
HMGCLL1Q8TB92 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
HMGCLL1Q8TB92 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
HMGCLL1Q8TB92 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HMGCLL1Q8TB92 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HMGCLL1Q8TB92 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.71■□□□□ 0.59
HMGCLL1Q8TB92 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HMGCLL1Q8TB92 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HMGCLL1Q8TB92 LETM1P2-201ENST00000597330 2178 ntBASIC18.71■□□□□ 0.59
HMGCLL1Q8TB92 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
HMGCLL1Q8TB92 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
HMGCLL1Q8TB92 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMGCLL1Q8TB92 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMGCLL1Q8TB92 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMGCLL1Q8TB92 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.7■□□□□ 0.58
HMGCLL1Q8TB92 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMGCLL1Q8TB92 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.7■□□□□ 0.58
HMGCLL1Q8TB92 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMGCLL1Q8TB92 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMGCLL1Q8TB92 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMGCLL1Q8TB92 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms